Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014950.1 Kokia drynarioides strain JFW-HI SEQ_129993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  198327

Tables:   1   

This is table  1  of  1  ( 56 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2628--2684
21
2.8
20
83
2
78
63
0
1
35
1.05
2628--2675
7
7.0
7
77
13
55
66
0
0
33
0.92
6899--6953
15
3.7
15
76
11
51
1
18
3
76
1.02
17294--17337
8
5.5
8
84
7
54
38
2
0
59
1.10
18223--18259
18
2.1
17
90
5
56
48
0
0
51
1.00
18424--18515
46
2.0
46
97
0
175
36
7
8
46
1.63
19043--19080
17
2.2
18
86
13
53
50
2
2
44
1.30
28554--28587
17
1.9
17
88
5
50
32
2
2
61
1.26
29270--29368
9
10.0
9
71
16
54
65
2
2
30
1.15
29525--29578
19
2.8
20
81
16
60
29
3
0
66
1.09
29535--29585
19
2.7
19
84
6
68
25
1
1
70
1.08
29599--29634
18
1.9
18
94
5
63
33
2
2
61
1.25
32024--32049
10
2.6
10
100
0
52
92
0
7
0
0.39
34036--34071
6
5.8
6
87
6
54
55
0
11
33
1.35
34070--34127
29
2.0
29
96
0
107
36
10
24
29
1.88
37074--37114
19
2.2
19
86
4
57
41
4
0
53
1.22
39626--39671
18
2.4
19
82
7
58
13
0
8
78
0.97
58943--58981
15
2.4
16
87
8
53
35
0
0
64
0.94
62904--62965
29
2.1
29
84
0
79
16
33
20
29
1.94
66051--66286
87
2.7
87
95
0
418
26
14
22
36
1.93
111137--111179
22
2.0
22
81
9
52
62
9
4
23
1.44
111210--111295
30
2.9
30
91
3
131
45
18
17
18
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111234--111282
14
3.4
14
78
10
62
48
16
16
18
1.81
111246--111295
16
3.2
16
75
11
59
42
22
18
18
1.90
111328--111446
56
2.1
56
98
0
229
50
2
5
42
1.37
112801--112939
52
2.7
52
84
2
181
29
14
20
35
1.92
112933--113051
60
2.0
61
86
1
168
31
15
21
31
1.94
113565--113624
21
2.8
22
77
7
70
36
13
21
28
1.91
119209--119238
15
1.9
16
93
6
53
33
0
0
66
0.92
119340--119407
24
2.8
23
77
16
66
66
1
0
32
1.01
124356--124409
26
2.1
26
82
6
65
57
5
3
33
1.40
126765--126835
27
2.7
26
75
14
65
63
2
1
32
1.18
128334--128392
23
2.6
22
78
5
64
49
0
3
47
1.18
133154--133262
43
2.5
43
100
0
218
37
15
1
44
1.57
137080--137136
28
2.0
29
89
3
89
29
1
8
59
1.38
137802--137836
16
2.2
16
90
10
54
51
2
2
42
1.31
138315--138339
2
12.5
2
100
0
50
52
0
0
48
1.00
140584--140670
30
2.9
30
80
8
97
41
2
3
52
1.31
143291--143329
6
6.5
6
100
0
78
17
15
0
66
1.25
146468--146687
109
2.0
109
100
0
440
29
19
22
29
1.98
149542--149648
48
2.2
48
94
0
187
52
14
19
13
1.74
152915--153026
59
1.9
59
96
0
206
33
11
11
42
1.77
153157--153204
23
2.2
23
85
7
64
52
0
4
43
1.20
164556--164642
31
2.8
32
84
8
108
48
5
18
27
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
166471--166507
13
2.6
15
83
12
51
32
0
0
67
0.91
169279--169513
118
2.0
118
99
0
461
30
4
28
35
1.78
169614--169668
4
13.8
4
92
0
65
34
0
0
65
0.93
169610--169679
12
6.2
12
82
8
67
37
0
0
62
0.95
177185--177214
2
15.0
2
100
0
60
50
0
0
50
1.00
177540--177588
22
2.3
20
83
12
71
24
16
16
42
1.87
177548--177591
22
2.0
22
100
0
88
27
13
18
40
1.88
178062--178113
6
8.2
6
78
18
52
19
3
1
75
1.06
178062--178130
19
3.6
18
76
20
59
18
4
1
75
1.05
180607--180640
15
2.4
14
85
9
50
23
0
0
76
0.79
183472--183508
16
2.3
16
85
0
56
45
0
13
40
1.43
183704--183732
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

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