Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014959.1 Kokia drynarioides strain JFW-HI SEQ_130003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  119183

Tables:   1   

This is table  1  of  1  ( 44 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5789--5823
15
2.2
16
90
5
54
65
2
0
31
1.07
6396--6500
22
4.6
22
69
8
75
61
12
5
20
1.50
23310--23343
2
17.0
2
87
0
50
0
50
0
50
1.00
28066--28246
99
1.8
98
83
8
240
24
14
8
52
1.70
28354--28404
15
3.2
16
70
13
52
23
0
1
74
0.92
28381--28487
16
6.8
16
68
15
53
26
2
1
69
1.13
28445--28488
16
2.8
16
93
3
72
27
0
0
72
0.85
28326--28506
84
2.2
85
85
9
239
27
3
2
66
1.21
28578--28632
13
4.1
14
77
9
53
50
1
0
47
1.11
32729--32771
21
2.1
21
86
4
61
34
2
4
58
1.32
32755--32900
31
4.8
30
68
15
84
40
9
6
43
1.62
37752--37802
17
3.0
16
83
11
66
74
1
21
1
1.02
52407--52455
19
2.5
20
78
18
59
59
4
2
34
1.28
53269--53327
31
1.9
31
85
0
82
44
10
5
40
1.60
54303--54352
25
2.0
25
92
0
82
58
2
2
38
1.21
56741--56810
29
2.4
30
80
7
90
31
1
2
64
1.17
56770--56819
23
2.2
23
89
7
75
26
2
2
70
1.09
56975--57033
24
2.5
23
86
10
84
61
1
0
37
1.07
57268--57343
36
2.2
33
81
9
89
40
1
7
50
1.40
57680--57758
41
1.9
41
87
5
115
36
35
12
15
1.85
57712--57859
55
2.7
55
86
2
201
31
33
14
20
1.93
57988--58025
6
6.7
6
88
11
62
86
13
0
0
0.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76017--76081
4
16.0
4
71
9
51
67
0
30
1
1.00
76014--76068
13
4.0
13
77
13
65
69
0
30
0
0.89
76018--76075
29
2.1
27
87
6
80
67
0
32
0
0.91
76121--76166
20
2.4
19
85
7
65
34
2
0
63
1.07
77060--77218
80
2.0
79
98
0
300
31
13
33
20
1.91
79458--79540
28
3.0
28
76
13
75
26
9
19
44
1.81
79770--79814
21
2.1
21
87
0
63
28
15
33
22
1.95
79808--79943
45
3.0
45
82
0
164
21
22
25
31
1.98
81845--81893
16
3.2
16
75
16
59
34
0
6
59
1.22
82371--82412
21
2.0
21
86
4
59
59
14
2
23
1.47
82487--82525
16
2.4
16
86
0
51
69
2
0
28
1.02
82568--82592
12
2.1
12
100
0
50
52
0
0
48
1.00
83583--83607
3
8.3
3
100
0
50
36
0
0
64
0.94
83678--83716
20
1.9
21
89
5
62
46
2
0
51
1.14
84542--84646
27
3.8
26
73
14
86
25
13
14
46
1.81
84637--84697
31
1.9
31
87
12
88
29
9
6
54
1.59
86120--86152
2
16.5
2
100
0
66
51
0
0
48
1.00
92867--92901
18
1.9
18
88
11
54
11
17
8
62
1.52
100592--100629
10
3.8
10
86
13
60
50
26
10
13
1.73
100590--100630
20
2.0
20
100
0
82
51
24
9
14
1.72
101005--101038
2
17.0
2
100
0
68
50
0
0
50
1.00
109634--109668
3
11.7
3
87
0
52
5
0
62
31
1.18

Tables:   1

The End!