Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014968.1 Kokia drynarioides strain JFW-HI SEQ_130012, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  109990

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--476
34
2.0
34
89
10
106
47
14
18
18
1.82
20720--20777
27
2.1
28
87
9
84
68
6
22
1
1.22
28856--28960
31
3.5
31
70
17
85
26
19
8
45
1.78
30386--30853
201
2.3
203
89
1
708
36
24
14
24
1.92
33345--33390
18
2.4
19
82
7
58
69
4
0
26
1.07
33358--33400
18
2.4
17
81
11
50
67
4
0
27
1.10
33446--33488
18
2.4
19
84
11
63
27
0
4
67
1.10
35956--36002
17
2.8
17
90
0
67
38
2
0
59
1.09
36149--36174
3
8.7
3
100
0
52
69
0
0
30
0.89
37206--37449
30
8.3
29
79
5
240
36
27
0
35
1.63
37206--37409
59
3.5
59
81
5
207
37
26
0
36
1.57
37426--37506
29
2.8
29
84
0
90
43
27
1
28
1.63
37503--37624
29
4.1
30
75
10
92
36
24
4
34
1.77
40770--40804
18
1.9
18
88
0
52
60
5
2
31
1.35
43262--43292
14
2.1
15
94
5
55
22
3
0
74
0.96
49826--50000
83
2.1
84
78
6
196
52
11
1
34
1.48
51306--51369
30
2.1
30
82
8
76
43
14
6
35
1.70
60882--60925
16
2.9
16
87
12
58
40
4
0
54
1.21
60890--60930
21
2.0
21
90
0
64
39
4
0
56
1.21
60882--60959
31
2.6
29
78
11
77
42
5
1
51
1.32
60894--60955
30
2.1
30
82
11
74
40
6
1
51
1.37
67555--67727
83
2.1
84
84
4
226
29
10
14
45
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73884--73917
16
2.1
16
88
0
50
58
2
0
38
1.13
80826--80850
4
6.2
4
100
0
50
0
0
24
76
0.80
81444--81468
5
5.0
5
100
0
50
0
60
0
40
0.97
82950--83018
33
2.1
33
100
0
138
21
17
21
39
1.93
84147--84199
21
2.5
21
70
11
54
15
15
1
67
1.31
89819--89859
18
2.3
18
83
4
57
46
4
9
39
1.58
94336--94367
7
4.6
7
96
0
55
62
9
0
28
1.26
96579--96624
14
3.2
14
81
3
56
67
4
2
26
1.21
105166--105204
2
19.5
2
83
0
51
43
48
5
2
1.38
105937--105966
14
2.1
14
100
0
60
46
13
33
6
1.69

Tables:   1

The End!