Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014971.1 Kokia drynarioides strain JFW-HI SEQ_130015, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  274434

Tables:   1   

This is table  1  of  1  ( 63 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12972--13354
190
2.0
190
94
1
669
35
21
18
24
1.96
14030--14070
11
3.7
11
81
18
50
34
0
2
63
1.08
16202--16321
21
6.2
20
72
23
82
60
2
4
32
1.29
16232--16322
18
4.9
18
76
23
75
61
2
3
32
1.24
16240--16330
27
3.4
27
71
15
73
62
2
3
31
1.23
16200--16323
10
12.8
10
70
17
68
60
2
4
33
1.28
16253--16330
18
4.3
19
72
16
51
65
2
2
29
1.19
19750--19897
23
6.3
23
84
6
190
11
22
22
43
1.85
19750--19925
48
3.8
44
80
11
165
11
23
22
43
1.85
24001--24197
43
4.6
43
84
5
238
35
10
25
28
1.89
24008--24240
43
5.5
42
80
8
141
35
10
25
28
1.89
38237--38356
58
2.1
58
90
3
188
32
0
20
47
1.50
40449--40830
195
2.0
196
84
4
506
28
20
25
25
1.99
41560--41611
21
2.5
21
78
6
61
25
13
28
32
1.93
50780--50879
31
3.2
31
84
2
119
33
9
11
47
1.70
64038--64084
24
1.9
25
86
4
69
55
8
4
31
1.49
64362--64399
18
2.1
18
85
9
51
50
2
0
47
1.15
78472--78512
21
2.0
21
85
0
55
21
2
2
73
1.07
90351--90403
19
2.8
18
75
8
52
45
3
0
50
1.19
92394--92456
29
2.2
29
85
5
83
23
0
6
69
1.11
93356--93423
30
2.3
30
79
2
75
38
19
17
25
1.93
93740--93774
3
11.7
3
100
0
70
31
0
0
68
0.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118956--118997
2
21.0
2
100
0
84
50
0
0
50
1.00
119823--119884
17
3.5
17
82
6
70
41
0
1
56
1.09
123643--123718
17
4.2
16
79
14
62
68
6
3
21
1.29
123755--123807
17
3.0
17
78
15
63
60
1
0
37
1.08
123827--123870
20
2.1
21
87
4
63
65
0
9
25
1.21
124391--124435
21
2.1
21
95
0
81
24
8
11
55
1.63
128021--128064
21
2.1
21
83
8
54
45
4
0
50
1.22
130626--130938
156
2.0
156
96
0
581
38
18
9
33
1.84
156194--156281
31
2.8
30
70
13
72
45
7
9
37
1.65
157321--157394
17
4.2
17
67
19
53
35
0
2
62
1.10
157319--157399
27
3.0
26
72
19
69
35
0
3
60
1.15
159617--159687
31
2.3
31
87
0
97
45
16
19
18
1.86
164740--164786
18
2.5
19
79
6
51
51
0
2
46
1.13
168321--168378
26
2.2
26
84
3
71
36
18
5
39
1.74
168535--168571
12
3.1
12
84
0
56
21
13
0
64
1.27
176936--176963
2
14.0
2
100
0
56
50
0
50
0
1.00
183181--183209
2
14.5
2
100
0
58
0
0
48
51
1.00
186044--186083
19
2.0
20
85
4
55
60
0
10
30
1.30
195814--195870
30
2.0
28
89
6
87
52
10
5
31
1.58
196336--196388
16
3.5
15
77
7
54
43
1
3
50
1.30
196324--196388
30
2.1
31
88
8
98
41
1
4
52
1.31
202513--202575
10
6.5
10
73
14
60
31
3
0
65
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
202541--202593
21
2.5
20
79
11
54
32
0
1
66
1.03
204026--204084
12
4.9
12
82
0
73
67
16
5
10
1.37
204024--204084
24
2.5
24
86
0
86
68
16
4
9
1.34
204026--204107
36
2.2
37
85
6
105
67
17
6
9
1.40
204087--204177
21
4.6
20
80
12
107
67
17
7
7
1.40
204090--204164
37
2.0
38
89
2
116
70
16
6
6
1.30
215988--216024
19
1.9
19
94
0
65
51
16
8
24
1.71
219509--219540
3
10.7
3
100
0
64
31
0
0
68
0.90
220429--220513
42
2.0
44
83
4
111
30
27
18
23
1.98
230720--230787
29
2.3
29
100
0
136
25
7
36
30
1.83
235545--235628
26
3.2
26
65
18
75
45
4
2
47
1.36
235527--235631
52
2.0
52
100
0
210
41
5
3
48
1.45
240898--240993
30
3.1
31
71
16
83
38
4
2
55
1.31
250719--250776
29
2.0
29
89
0
89
51
10
5
32
1.58
251300--251353
16
3.4
16
75
10
56
18
24
0
57
1.40
252812--252837
11
2.4
11
100
0
52
73
0
0
26
0.84
260179--260208
13
2.4
13
94
5
53
0
10
0
90
0.47
261829--261860
14
2.3
14
94
0
55
50
0
0
50
1.00
270443--270473
6
5.2
6
100
0
62
80
0
0
19
0.71

Tables:   1

The End!