Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014972.1 Kokia drynarioides strain JFW-HI SEQ_130016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  90619

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5934--5987
27
2.0
27
100
0
108
55
22
7
14
1.64
6978--7027
24
2.1
24
92
0
82
22
20
28
30
1.98
11127--11243
54
2.2
54
98
0
225
19
7
29
43
1.79
12684--12990
80
3.8
81
79
7
280
34
28
15
21
1.94
12677--12990
166
1.9
166
80
2
371
34
28
16
21
1.95
15377--15499
60
2.1
59
92
4
203
38
16
19
26
1.92
15502--15626
43
2.9
42
78
1
133
33
24
13
28
1.93
16015--16059
21
2.1
21
91
0
72
2
48
15
33
1.57
17503--17941
219
2.0
219
99
0
860
37
13
11
36
1.81
18863--18912
25
2.0
25
96
3
93
48
12
0
40
1.40
21953--22299
121
2.9
121
92
4
544
41
2
6
50
1.38
24355--24405
20
2.5
20
100
0
102
43
0
37
19
1.51
24748--24799
21
2.6
18
75
21
50
42
1
0
55
1.10
26668--26837
41
4.1
41
82
0
196
24
22
22
30
1.99
26808--26938
41
3.2
41
83
2
165
28
21
22
27
1.99
26680--26938
82
3.2
81
79
6
202
26
22
23
28
1.99
36587--36674
23
3.8
23
86
0
131
40
25
20
13
1.89
36584--36685
46
2.2
46
89
0
150
43
22
20
13
1.87
36584--36685
23
4.5
22
82
3
123
43
22
20
13
1.87
39794--39845
22
2.5
22
84
9
65
71
1
1
25
1.07
39794--39861
21
3.2
21
82
10
68
69
2
1
26
1.12
40709--40752
20
2.2
20
100
0
88
31
9
25
34
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43218--43305
44
2.0
44
81
2
104
51
0
20
28
1.48
47017--47056
12
3.6
12
74
19
50
32
0
2
65
1.06
47019--47058
21
1.9
21
100
0
80
27
0
2
70
1.01
47607--47678
28
2.5
28
80
13
76
47
0
4
48
1.21
47664--47700
11
3.3
11
85
7
56
37
0
0
62
0.96
47664--47698
12
3.0
12
87
4
54
37
0
0
62
0.95
48847--48871
7
3.6
7
100
0
50
16
0
0
84
0.63
50289--50345
19
3.0
19
82
5
71
22
7
33
36
1.81
56776--56812
18
2.1
18
89
0
56
48
0
27
24
1.51
67992--68047
20
2.8
20
82
12
71
41
3
1
53
1.29
69100--69156
30
1.9
30
85
7
80
42
15
17
24
1.88
74559--74627
34
2.0
34
88
5
104
15
21
8
53
1.69
87080--87119
2
20.0
2
100
0
80
50
0
0
50
1.00
88017--88060
17
2.7
16
82
6
52
31
0
2
65
1.05
88795--88873
17
4.3
18
76
14
74
48
7
8
35
1.63
88972--88996
12
2.1
12
100
0
50
40
16
8
36
1.77
90585--90619
2
17.5
2
100
0
70
48
0
0
51
1.00

Tables:   1

The End!