Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014981.1 Kokia drynarioides strain JFW-HI SEQ_130025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  189539

Tables:   1   

This is table  1  of  1  ( 65 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16021--16045
2
12.5
2
100
0
50
52
0
0
48
1.00
21252--21295
22
2.0
22
95
0
79
52
6
4
36
1.49
34396--34494
48
2.0
49
96
1
182
40
11
10
38
1.74
35910--35977
31
2.2
31
100
0
136
61
13
11
13
1.56
39030--39061
2
16.0
2
100
0
64
50
0
0
50
1.00
46964--48671
516
3.5
470
81
7
1682
39
17
14
27
1.89
47713--48793
516
2.1
517
87
1
1549
39
17
15
27
1.90
48723--48859
70
2.0
70
89
2
213
43
13
16
27
1.85
49100--49355
127
2.0
132
84
7
344
32
17
21
27
1.96
50684--50718
2
17.5
2
100
0
70
51
0
0
48
1.00
54467--54511
19
2.4
19
81
7
56
37
0
4
57
1.19
55309--55338
16
1.9
16
93
6
53
16
13
0
70
1.18
55306--55364
21
2.7
22
87
7
68
15
10
1
72
1.18
55318--55364
21
2.2
22
92
3
78
14
8
2
74
1.15
62063--62137
24
3.1
24
94
0
123
26
12
10
50
1.72
62063--62154
48
1.9
48
84
0
121
27
14
10
47
1.77
66723--66763
3
13.7
3
84
0
55
31
31
0
36
1.58
67157--67196
20
2.0
20
100
0
80
45
30
15
10
1.78
69735--69767
14
2.4
14
90
10
50
63
3
0
33
1.10
73170--73205
6
5.8
6
87
6
54
36
0
63
0
0.94
73165--73205
13
3.2
13
82
10
57
39
0
60
0
0.96
73260--73308
13
3.5
13
74
15
53
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73244--73316
29
2.5
29
95
0
128
46
1
0
52
1.09
73278--73319
20
2.0
22
90
9
70
52
0
0
47
1.00
73269--73325
20
3.0
20
74
23
59
47
1
0
50
1.11
75275--75313
18
2.1
19
86
13
55
43
0
0
56
0.99
77308--77514
60
3.5
56
71
20
154
35
14
13
36
1.86
77491--77599
45
2.4
46
83
6
123
38
17
14
29
1.89
77562--77685
62
2.0
61
87
4
178
31
18
15
34
1.92
77581--77781
109
1.8
109
89
0
312
32
16
12
38
1.86
77762--78001
61
3.9
62
78
9
242
37
14
19
28
1.91
77761--78001
62
3.9
62
78
9
255
37
14
19
29
1.91
77776--78001
123
1.8
123
87
3
339
35
15
19
29
1.93
77858--78097
56
4.1
56
78
7
176
36
18
16
28
1.93
77919--78235
56
5.4
56
75
9
208
35
18
16
29
1.93
85934--85971
18
2.1
18
90
0
58
57
2
0
39
1.12
86048--86102
23
2.4
24
76
14
62
49
1
0
49
1.11
90724--90749
3
8.7
3
100
0
52
65
0
0
34
0.93
91985--92026
22
2.0
21
85
4
57
47
0
4
47
1.23
92053--92106
27
2.0
27
85
3
74
62
0
1
35
1.06
99119--99729
305
2.0
306
98
0
1188
35
11
12
39
1.80
102240--102336
47
2.1
47
96
0
176
39
20
12
27
1.89
106111--106149
19
2.1
19
95
0
69
46
0
5
48
1.24
107103--107144
21
2.1
21
86
8
61
54
9
21
14
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
115659--115804
9
16.0
9
68
16
70
30
4
2
63
1.27
115661--115825
19
8.9
19
69
13
78
29
4
2
64
1.25
115665--115805
55
2.6
54
78
5
158
29
4
2
63
1.27
115784--115834
20
2.6
19
79
17
59
27
3
0
68
1.07
115662--115823
55
2.9
55
73
9
143
28
4
2
64
1.25
115893--116117
87
2.6
86
82
5
245
32
7
20
39
1.81
118426--118726
24
12.3
24
84
6
345
17
32
24
24
1.97
138429--138460
2
16.0
2
100
0
64
50
0
0
50
1.00
139059--139122
25
2.5
25
73
16
60
39
7
0
53
1.30
145753--145783
15
2.1
15
93
0
53
35
19
22
22
1.96
154089--154136
21
2.3
21
88
0
69
27
4
10
58
1.49
155324--155409
44
2.0
44
83
0
109
26
6
15
51
1.68
158940--158968
7
4.1
7
100
0
58
55
0
0
44
0.99
159980--160038
30
2.0
30
83
6
75
33
5
11
49
1.62
165790--165843
28
2.0
27
82
10
67
48
0
7
44
1.31
169875--169932
30
1.9
30
85
3
80
50
8
3
37
1.50
175762--175795
17
2.0
17
100
0
68
35
17
17
29
1.93
176834--176922
44
2.0
44
97
0
169
25
31
17
24
1.97
185355--185399
19
2.4
17
80
20
54
26
11
0
62
1.29
187325--187372
22
2.1
24
88
7
73
35
2
0
62
1.07
187825--187877
26
2.0
27
82
10
65
54
1
0
43
1.11

Tables:   1

The End!