Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014993.1 Kokia drynarioides strain JFW-HI SEQ_130037, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99419

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2888--2917
6
5.0
6
91
0
51
20
46
0
33
1.51
2936--2960
6
4.2
6
100
0
50
0
16
36
48
1.46
6273--6451
88
2.0
88
97
0
340
33
12
30
23
1.91
6941--7002
30
2.1
30
87
0
88
22
3
16
58
1.52
8509--8632
62
2.0
62
96
0
230
44
13
12
29
1.80
12813--12994
30
6.1
30
82
3
197
21
54
8
14
1.68
12816--12994
90
2.0
90
83
4
227
22
53
8
15
1.69
12945--13024
30
2.7
30
90
0
115
21
60
8
10
1.56
12990--13067
18
4.3
18
75
6
68
26
55
8
8
1.61
13170--13207
15
2.5
15
87
8
51
39
36
2
21
1.67
21820--21858
14
2.9
14
84
3
53
87
0
7
5
0.68
26586--26640
27
2.0
27
100
0
110
38
14
14
32
1.87
26917--26970
23
2.4
23
81
3
65
57
7
3
31
1.44
31824--31887
31
2.1
31
87
0
92
42
10
12
34
1.78
32330--32362
2
16.5
2
93
0
57
45
3
0
51
1.16
32745--32801
20
2.9
20
78
2
62
43
0
1
54
1.10
36809--36854
24
1.9
24
82
8
58
43
2
2
52
1.25
55839--55882
16
2.8
16
83
10
54
40
13
2
43
1.57
57551--57626
28
2.6
28
78
17
66
50
2
3
43
1.34
59814--59856
23
1.9
22
90
4
68
55
0
6
37
1.27
65283--65394
55
2.0
55
96
0
206
46
10
15
27
1.78
66333--66371
19
2.1
19
85
0
51
28
0
2
69
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81806--81846
16
2.6
16
84
0
55
41
2
2
53
1.27
82358--82391
14
2.3
15
90
10
52
23
5
0
70
1.09
98324--98367
22
2.0
22
82
8
54
52
4
2
40
1.34

Tables:   1

The End!