Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01014999.1 Kokia drynarioides strain JFW-HI SEQ_130043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91011

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--89
18
2.7
18
83
0
60
25
27
0
47
1.52
42--84
6
7.2
6
89
0
59
20
30
0
48
1.50
3102--3135
16
2.2
15
89
5
50
38
11
0
50
1.39
4086--4138
23
2.2
24
83
6
63
52
0
1
45
1.11
23469--23515
18
2.6
18
77
12
51
76
8
8
6
1.15
23881--23922
16
2.5
17
80
7
59
73
7
2
16
1.15
24108--24154
3
15.7
3
100
0
94
68
0
0
31
0.90
28114--28141
7
4.0
7
100
0
56
42
14
14
28
1.84
28166--28203
16
2.4
16
95
0
67
15
26
26
31
1.96
31776--31809
15
2.3
15
89
0
50
52
0
47
0
1.00
33098--33209
59
1.9
59
90
0
179
20
16
12
50
1.76
42140--42174
6
6.0
6
96
3
63
48
0
0
51
1.00
42228--42258
14
2.2
14
94
0
53
32
0
6
61
1.21
43610--43699
21
4.2
21
76
12
67
10
2
15
72
1.21
43611--43723
42
2.6
42
83
6
120
10
3
15
70
1.28
43661--43755
44
2.2
44
83
11
115
12
3
13
70
1.28
43696--43776
41
1.9
43
82
12
105
13
4
12
69
1.35
45967--46079
9
11.7
9
67
21
52
58
1
4
35
1.29
52291--52356
30
2.2
30
84
10
82
46
4
0
48
1.22
53316--53343
6
4.7
6
100
0
56
14
85
0
0
0.59
55067--55123
24
2.6
21
74
15
53
47
1
1
49
1.22
57125--57158
17
2.0
17
88
0
50
64
2
8
23
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67745--67793
3
16.3
3
91
0
80
32
4
0
63
1.13
70618--70725
24
4.5
24
94
0
189
21
20
37
20
1.94
73251--73289
13
3.0
13
80
0
51
23
0
5
71
1.05
88188--88222
15
2.2
17
90
10
56
42
0
2
54
1.15

Tables:   1

The End!