Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015004.1 Kokia drynarioides strain JFW-HI SEQ_130048, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  190203

Tables:   1   

This is table  1  of  1  ( 62 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1893--1939
24
2.0
23
83
8
58
36
4
2
57
1.30
3290--3345
6
9.3
6
100
0
112
33
16
33
16
1.91
8307--8366
17
3.4
17
73
8
66
58
6
1
33
1.34
8487--8536
20
2.5
19
81
9
64
52
0
22
26
1.48
23511--23540
12
2.4
13
94
5
53
30
13
0
56
1.37
24395--24449
17
3.4
17
73
14
53
58
3
3
34
1.33
24771--24796
13
2.0
13
100
0
52
38
0
0
61
0.96
40979--41028
25
2.0
25
100
0
100
40
24
8
28
1.83
44860--44940
31
2.7
30
82
3
83
48
8
16
27
1.75
55454--55492
15
2.7
15
88
4
53
41
7
7
43
1.62
59909--59950
22
2.0
22
85
4
59
26
7
2
64
1.32
61127--61269
30
4.8
30
82
5
148
34
2
22
39
1.69
62269--62294
3
8.7
3
100
0
52
69
0
0
30
0.89
62958--63067
40
2.8
40
77
5
105
28
14
22
34
1.94
63180--63303
50
2.5
50
87
0
167
21
25
19
33
1.97
67384--67426
21
2.0
22
82
13
54
48
2
16
32
1.58
77274--77432
79
2.0
79
100
0
318
57
11
6
25
1.57
77494--77690
30
6.6
29
75
10
100
34
3
20
42
1.69
77578--77690
30
3.7
30
82
10
140
30
1
21
46
1.62
77536--77690
30
5.2
29
75
9
134
32
2
21
43
1.66
77596--77719
60
2.1
60
80
6
135
37
3
16
41
1.65
90616--90663
22
2.1
23
88
3
71
39
8
4
47
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90650--90693
22
2.0
23
86
4
63
38
9
6
45
1.63
91263--91332
33
2.2
32
82
12
81
61
5
0
32
1.20
98652--98685
16
2.2
16
90
10
54
29
0
8
61
1.26
99277--99310
16
2.1
16
88
0
50
44
8
2
44
1.50
100144--100335
23
8.3
23
79
10
146
44
21
21
11
1.84
100162--100314
69
2.2
69
80
12
179
45
21
20
12
1.84
105239--105274
11
3.0
13
80
19
51
22
0
11
66
1.22
105911--105973
9
6.6
9
73
12
54
39
7
0
52
1.31
110444--110481
16
2.3
17
86
4
51
63
2
26
7
1.35
115248--115288
15
2.6
16
88
7
57
87
0
2
9
0.62
115248--115288
16
2.5
16
88
4
55
87
0
2
9
0.62
115279--115360
29
2.9
28
77
15
87
63
2
3
30
1.24
115407--115471
13
5.4
13
72
20
52
63
0
0
36
0.95
115392--115478
36
2.5
35
79
9
97
63
1
0
35
1.02
115384--115480
31
2.9
30
71
26
81
61
1
0
37
1.03
115926--115989
28
2.3
28
83
0
74
60
0
0
39
0.97
115971--116031
30
2.0
32
87
6
90
52
1
0
45
1.10
118507--118827
157
2.0
158
95
0
581
28
14
15
41
1.87
119703--119738
16
2.2
16
90
5
54
16
8
16
58
1.61
125598--125668
29
2.4
30
79
11
85
47
8
7
36
1.61
127513--127540
5
5.6
5
100
0
56
17
0
0
82
0.68
135455--135491
5
7.2
5
87
6
56
75
0
24
0
0.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139032--139061
2
15.0
2
92
0
51
46
0
0
53
1.00
149454--149486
17
2.0
17
88
5
50
51
3
0
45
1.16
153149--153185
7
5.3
7
96
0
65
29
54
13
2
1.53
153616--153720
31
3.5
30
69
12
81
46
8
19
25
1.78
154854--154964
37
3.0
36
82
8
127
26
15
12
45
1.81
155583--155612
13
2.2
14
94
5
53
10
6
26
56
1.57
160818--160847
13
2.3
13
94
0
51
30
16
10
43
1.81
175391--175434
12
3.5
12
76
11
52
40
4
9
45
1.56
175400--175441
14
3.1
14
73
13
52
40
7
14
38
1.73
175391--175441
26
2.0
26
100
0
102
39
5
11
43
1.66
176688--176713
3
8.7
3
100
0
52
69
30
0
0
0.89
177154--177209
16
3.3
17
80
7
69
39
0
0
60
0.97
177181--177223
20
2.1
21
86
4
61
37
0
0
62
0.95
184059--184244
92
2.0
92
87
4
268
31
14
15
39
1.87
188149--188204
23
2.4
23
82
5
60
41
35
3
19
1.69
188884--188909
2
13.0
2
100
0
52
50
0
0
50
1.00
189734--189764
3
10.3
3
100
0
62
32
0
0
67
0.91
189901--189927
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!