Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015007.1 Kokia drynarioides strain JFW-HI SEQ_130051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33252

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
93
0
61
45
0
0
54
0.99
1843--1893
2
26.0
2
96
4
95
50
0
0
49
1.00
5764--6078
59
5.3
58
81
9
300
37
3
22
36
1.72
5764--6077
89
3.5
89
81
5
307
37
3
22
36
1.72
5721--6078
30
12.1
29
79
9
309
37
3
23
35
1.73
9507--9592
39
2.2
41
82
14
110
31
1
5
61
1.27
9537--9631
10
9.9
10
68
21
51
31
0
6
62
1.20
12018--12073
13
4.6
12
78
12
60
1
32
1
64
1.14
14891--14923
15
2.1
17
88
11
52
69
3
0
27
1.03
15214--15255
22
2.0
22
86
13
61
73
2
0
23
0.94
15232--15323
34
2.6
36
79
8
91
60
3
0
35
1.13
20557--20629
6
12.7
6
73
13
64
39
0
4
56
1.19
20557--20600
17
2.6
17
88
0
70
36
0
4
59
1.18
20569--20633
23
2.8
23
83
4
87
38
0
4
56
1.20
20655--20683
14
2.0
15
93
6
51
51
20
6
20
1.70
21342--21413
3
23.0
3
72
8
54
56
4
5
33
1.41
22508--22787
89
3.2
88
80
7
266
36
25
5
33
1.79
22507--22789
30
9.6
30
75
7
256
36
25
5
33
1.78
22507--22798
59
4.9
58
82
5
252
35
25
5
33
1.78
22689--22913
58
3.9
58
79
6
165
31
24
5
39
1.77
25231--25413
96
1.9
96
83
4
235
36
13
18
31
1.89
25836--26137
29
10.4
29
86
5
360
35
2
28
33
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25804--26137
87
3.8
87
83
5
415
35
2
29
33
1.72
27329--27368
18
2.2
18
86
0
53
35
10
7
47
1.65
28072--28151
17
4.7
17
89
3
117
53
2
0
43
1.14
28064--28123
23
2.6
23
84
7
68
53
3
0
43
1.17
28066--28151
6
15.0
6
72
22
69
53
2
0
44
1.13
28063--28116
10
5.4
10
72
24
51
55
1
0
42
1.10
31153--31189
14
2.6
14
91
0
56
67
0
2
29
1.04

Tables:   1

The End!