Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001501.1 Kokia drynarioides strain JFW-HI SEQ_113040, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  146277

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16488--16549
28
2.2
28
82
5
72
25
8
29
37
1.85
16558--16840
29
9.6
30
77
13
200
34
4
26
34
1.76
17860--17884
12
2.1
12
100
0
50
16
0
8
76
1.02
18669--18748
17
4.6
17
78
9
83
51
2
2
43
1.28
18656--18702
24
2.0
23
83
4
58
51
2
2
44
1.25
18656--18721
18
3.1
23
67
26
63
48
3
4
43
1.38
18669--18748
34
2.3
34
79
12
92
51
2
2
43
1.28
23875--23905
6
5.0
6
96
4
53
0
19
0
80
0.71
26989--27047
21
2.8
20
75
17
57
55
3
5
35
1.38
27655--27680
6
4.3
6
100
0
52
84
0
15
0
0.62
36949--37012
29
2.2
29
83
8
76
39
4
6
50
1.49
39475--39523
19
2.6
19
84
12
57
36
4
4
55
1.38
50725--50769
18
2.4
19
81
3
56
44
0
0
55
0.99
50726--50898
87
2.0
87
98
0
337
44
7
5
42
1.55
62979--63016
3
12.7
3
100
0
76
0
65
0
34
0.93
68678--68708
2
15.5
2
93
0
53
3
51
0
45
1.17
69148--69180
11
2.8
12
86
9
50
60
0
0
39
0.97
72374--72416
16
2.6
16
86
13
61
20
2
9
67
1.30
73877--73940
31
2.1
30
85
8
85
56
1
1
40
1.18
73905--73960
24
2.4
24
87
3
78
53
0
1
44
1.11
73900--74007
29
3.9
27
72
21
73
55
0
2
40
1.21
74964--75015
26
2.0
26
100
0
104
23
15
19
42
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79572--79643
34
2.1
34
94
0
126
43
1
4
51
1.29
80532--80696
65
2.5
65
100
0
330
30
1
48
18
1.59
82900--82942
16
2.8
15
77
16
52
27
0
2
69
1.00
86519--86573
29
1.9
28
81
3
65
32
0
5
61
1.19
93477--93510
16
2.1
17
88
5
52
14
58
0
26
1.36
107116--107187
35
2.1
35
86
5
101
54
5
16
23
1.63
120785--120846
27
2.3
26
86
8
79
37
4
9
48
1.57
121027--121107
29
2.7
29
84
5
90
48
12
7
32
1.68
123586--123625
2
20.0
2
100
0
80
50
0
0
50
1.00
126036--126075
17
2.2
19
86
8
57
85
0
10
5
0.75
127743--127823
30
2.7
30
82
16
105
61
0
2
35
1.09
127743--127816
10
7.4
11
72
18
63
63
0
2
33
1.09
128596--129033
227
1.9
227
85
1
601
40
15
8
35
1.78
131734--131951
29
7.4
30
76
16
199
29
4
33
33
1.78
131711--131965
59
4.3
59
88
3
370
30
3
31
34
1.76
131645--131926
118
2.4
119
82
6
301
29
5
31
34
1.80
133757--133833
17
4.6
16
77
9
73
50
5
1
42
1.32
133758--133833
34
2.2
34
83
0
89
51
5
1
42
1.33
145931--145957
11
2.5
11
100
0
54
70
14
7
7
1.32

Tables:   1

The End!