Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015011.1 Kokia drynarioides strain JFW-HI SEQ_130055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27149

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2254--2325
30
2.5
29
73
24
71
47
4
1
47
1.30
2254--2324
31
2.4
30
72
22
71
46
4
1
47
1.30
4896--4929
17
2.0
17
100
0
68
41
5
17
35
1.74
5775--5807
3
11.0
3
100
0
66
33
0
0
66
0.92
6752--6823
6
12.5
6
79
8
69
55
4
1
38
1.28
6763--6823
23
2.7
23
87
2
88
55
3
1
39
1.26
6733--6814
34
2.4
36
83
6
107
52
3
3
40
1.37
6718--6852
17
7.5
17
73
12
90
53
4
4
37
1.41
7284--7836
209
2.6
209
88
0
791
21
21
19
37
1.94
7795--7911
45
2.5
47
81
10
132
27
22
14
35
1.93
7706--8034
167
2.0
168
87
2
482
23
20
18
37
1.94
7494--8242
376
2.0
376
87
1
1079
21
21
19
37
1.94
7872--8293
208
2.0
207
87
1
612
20
21
19
38
1.93
8309--8561
39
6.7
38
70
23
144
24
20
31
23
1.98
8324--8524
74
2.7
75
79
13
177
25
19
32
21
1.97
8436--8504
35
2.0
35
91
0
111
28
21
28
20
1.98
8347--8561
113
1.9
114
94
0
378
24
21
31
22
1.98
8834--9014
48
3.7
49
79
5
150
16
33
18
32
1.93
10779--10817
19
2.0
20
85
14
55
0
23
0
76
0.78
10866--10894
3
9.7
3
100
0
58
0
31
0
68
0.89
16245--16335
6
15.7
6
75
11
73
54
4
1
39
1.27
16245--16328
34
2.4
35
88
5
127
54
4
1
39
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16280--16335
23
2.4
23
87
0
85
55
3
1
39
1.28
16230--16343
17
6.2
17
76
14
102
53
3
2
40
1.32
16292--16341
23
2.2
23
88
0
73
62
4
0
34
1.14
16554--16601
25
1.9
25
86
0
69
29
18
18
33
1.95
18853--18924
30
2.5
29
73
24
71
47
4
1
47
1.30
18853--18923
31
2.4
30
72
22
71
46
4
1
47
1.30
20955--20993
20
2.0
20
84
0
51
28
23
2
46
1.65
24141--24254
29
3.9
30
75
10
94
35
3
21
39
1.71
24241--24371
30
4.5
30
76
4
124
34
6
22
36
1.81
24212--24371
88
1.8
87
81
6
198
33
6
23
36
1.80
24212--24371
30
5.5
29
74
5
117
33
6
23
36
1.80
24241--24371
58
2.2
59
82
1
147
34
6
22
36
1.81
24365--24550
90
2.1
88
83
10
227
36
3
22
37
1.71
24365--24553
30
6.3
31
81
10
193
36
3
23
37
1.71
24560--24670
30
3.7
30
78
2
116
36
1
23
38
1.66
24453--24650
107
1.9
107
86
6
285
37
2
21
38
1.67
26466--26506
2
20.5
2
84
0
55
41
0
7
51
1.30
26466--26506
12
3.4
12
93
0
64
41
0
7
51
1.30

Tables:   1

The End!