Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015017.1 Kokia drynarioides strain JFW-HI SEQ_130061, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111398

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4364--4404
21
1.9
22
90
5
66
73
9
7
9
1.26
23976--25324
688
2.0
689
95
0
2439
41
12
10
35
1.77
30400--30737
29
11.6
29
80
7
337
29
3
31
35
1.74
30400--30748
87
4.0
87
80
6
384
29
3
32
35
1.73
32460--32532
6
12.7
6
73
13
64
46
2
2
47
1.31
32460--32530
11
6.3
11
73
11
63
46
2
2
47
1.31
32462--32511
17
2.9
17
77
11
57
50
4
2
44
1.32
32481--32532
23
2.2
23
89
3
77
48
3
1
46
1.31
32502--32546
17
2.6
18
82
3
56
53
2
4
40
1.33
32481--32546
23
2.8
23
81
9
62
51
4
3
40
1.38
32614--32652
3
13.0
3
84
10
53
30
5
0
64
1.15
34684--34744
29
2.0
30
87
6
88
42
18
9
29
1.82
35309--35377
24
2.8
23
69
21
59
56
1
1
40
1.17
35323--35375
28
1.9
27
85
11
72
56
1
1
39
1.21
36276--36329
27
1.9
27
81
7
63
50
1
9
38
1.45
44412--44749
29
11.6
29
80
7
337
29
3
31
35
1.74
44412--44760
87
4.0
87
80
6
384
29
3
32
35
1.73
46472--46544
6
12.7
6
73
13
64
46
2
2
47
1.31
46472--46542
11
6.3
11
73
11
63
46
2
2
47
1.31
46474--46523
17
2.9
17
77
11
57
50
4
2
44
1.32
46493--46544
23
2.2
23
89
3
77
48
3
1
46
1.31
46514--46558
17
2.6
18
82
3
56
53
2
4
40
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46493--46558
23
2.8
23
81
9
62
51
4
3
40
1.38
46626--46664
3
13.0
3
84
10
53
30
5
0
64
1.15
48696--48756
29
2.0
30
87
6
88
42
18
9
29
1.82
49321--49389
24
2.8
23
69
21
59
56
1
1
40
1.17
49335--49387
28
1.9
27
85
11
72
56
1
1
39
1.21
50288--50341
27
1.9
27
81
7
63
50
1
9
38
1.45
56901--56946
18
2.5
17
86
13
65
54
8
4
32
1.51
80869--81000
60
2.2
61
82
9
171
35
8
21
34
1.83
90894--91000
53
2.0
53
100
0
214
19
22
20
37
1.94
93202--93282
39
2.1
39
100
0
162
27
25
14
32
1.95
100792--100860
31
2.2
30
80
10
77
46
7
14
31
1.72
102222--102261
21
1.9
20
90
10
62
77
0
2
20
0.88
108086--108130
14
2.9
16
80
16
58
53
0
0
46
1.00
109993--110055
31
2.1
31
85
8
85
33
7
11
47
1.68

Tables:   1

The End!