Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015031.1 Kokia drynarioides strain JFW-HI SEQ_130075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59192

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
177--479
58
5.2
59
79
9
261
35
4
26
32
1.78
279--581
29
10.1
30
75
14
250
34
4
27
33
1.78
177--480
29
10.5
29
72
17
195
35
4
26
32
1.78
470--499
9
3.3
9
95
0
51
20
0
30
50
1.49
479--618
29
4.8
29
80
1
154
32
4
27
36
1.76
383--580
97
2.1
96
86
6
276
34
4
26
34
1.76
481--614
58
2.3
58
85
5
171
32
4
25
37
1.76
2370--2660
29
10.0
30
77
10
250
33
4
27
34
1.77
2370--2660
88
3.3
86
82
7
322
33
4
27
34
1.77
2379--2697
117
2.7
118
79
9
350
34
4
26
34
1.77
2379--2693
29
10.7
30
74
11
192
34
4
26
34
1.77
2409--2697
88
3.3
89
80
7
245
34
4
26
33
1.78
4299--4382
17
4.9
17
80
16
77
53
3
3
39
1.36
4297--4363
34
2.0
33
85
11
91
50
4
2
41
1.37
4333--4382
19
2.8
19
91
8
79
58
0
4
38
1.17
4330--4417
41
2.1
42
81
6
108
54
2
5
37
1.37
16534--16559
3
8.7
3
100
0
52
0
34
0
65
0.93
17910--18005
48
2.0
48
89
0
147
50
11
8
30
1.68
22479--22543
30
2.2
30
91
5
105
43
9
4
43
1.57
31093--31217
23
5.5
22
78
8
108
12
20
24
43
1.86
35796--35862
33
1.9
36
88
8
104
59
4
28
7
1.44
36720--36848
23
5.5
23
76
8
111
11
22
23
42
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41461--41548
25
3.3
25
68
20
70
42
3
15
38
1.64
41443--41552
55
2.0
55
94
0
193
42
2
17
37
1.63
41810--41846
15
2.3
17
81
9
51
62
0
0
37
0.96
45234--45270
2
18.5
2
100
0
74
51
0
0
48
1.00

Tables:   1

The End!