Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015035.1 Kokia drynarioides strain JFW-HI SEQ_130079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  108629

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1016--1095
23
3.5
22
84
3
97
36
27
23
12
1.91
1013--1111
23
4.4
22
77
8
92
39
24
24
12
1.89
6518--6580
19
3.2
20
84
6
76
41
1
3
53
1.26
6870--6898
10
2.7
11
89
10
51
24
0
0
75
0.80
7387--7578
103
1.9
103
100
0
384
29
17
29
23
1.97
40981--41019
19
2.1
19
100
0
78
38
10
10
41
1.73
44034--44093
32
1.9
30
83
6
75
50
1
3
45
1.28
47054--47101
21
2.3
21
88
0
69
14
56
6
22
1.61
47042--47100
30
2.0
30
86
0
82
11
54
10
23
1.67
48303--48332
15
2.0
15
93
0
51
23
0
43
33
1.54
50942--50973
16
1.9
17
93
6
57
43
0
0
56
0.99
52470--52609
69
2.0
69
100
0
280
32
11
10
45
1.75
54108--54135
3
9.3
3
100
0
56
67
0
32
0
0.91
55170--55403
118
2.0
118
97
0
441
32
8
19
39
1.82
56256--56297
17
2.6
16
81
14
50
47
0
4
47
1.23
58006--58038
15
2.1
16
94
5
59
78
15
0
6
0.93
68155--68222
14
4.9
13
73
20
50
29
1
25
44
1.63
71596--71655
28
2.0
31
84
9
81
33
10
11
45
1.74
78968--78999
15
2.1
15
94
0
55
9
0
53
37
1.34
79234--79265
15
2.1
15
94
0
55
37
53
0
9
1.34
85627--85708
40
2.0
40
97
0
155
43
17
3
35
1.66
85732--85760
8
3.6
8
100
0
58
0
65
0
34
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92208--92239
15
2.1
15
94
0
55
78
3
0
18
0.89
98112--98147
17
2.1
17
100
0
72
27
19
22
30
1.98
99557--99597
14
2.8
15
78
14
50
46
7
4
41
1.53

Tables:   1

The End!