Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015040.1 Kokia drynarioides strain JFW-HI SEQ_130084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  158092

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2580--2609
5
6.0
5
100
0
60
20
40
0
40
1.52
2830--2880
27
2.0
26
82
17
63
41
9
3
45
1.56
8264--8318
18
3.1
18
100
0
110
34
10
21
32
1.89
9571--9618
4
11.5
4
78
8
51
50
2
0
47
1.12
26093--26144
23
2.3
23
82
0
59
36
13
7
42
1.73
29757--29829
23
3.2
23
92
0
119
39
21
23
15
1.91
52423--52473
25
2.0
25
100
0
102
41
15
31
11
1.83
82295--82343
21
2.5
20
81
15
57
69
0
8
22
1.14
82484--82543
25
2.3
26
80
11
70
58
3
0
38
1.15
90422--90494
38
1.9
38
88
5
112
43
31
6
17
1.75
92628--92697
35
2.0
35
82
0
86
30
27
18
24
1.98
100238--100290
21
2.5
21
85
11
65
33
24
13
28
1.93
101322--101366
2
22.5
2
95
0
81
48
0
2
48
1.13
104026--104133
54
2.0
54
100
0
216
20
22
22
35
1.96
109649--109678
6
5.0
6
100
0
60
50
0
33
16
1.46
121283--121519
30
7.9
30
77
11
227
32
24
3
39
1.72
121282--121494
59
3.6
60
82
11
242
32
23
3
40
1.71
130676--131356
77
9.0
77
82
6
759
33
22
18
25
1.97
131189--131310
64
1.9
65
87
1
183
40
18
18
21
1.91
131254--131353
38
2.6
38
77
12
98
38
19
19
24
1.94
133023--133248
30
7.6
30
82
5
226
31
21
2
43
1.66
133027--133228
90
2.2
89
87
2
296
31
22
2
43
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133465--133559
47
2.0
47
100
0
190
14
23
10
51
1.73
136853--136906
28
1.9
28
100
0
108
22
7
31
38
1.82
140270--140376
55
2.0
54
94
5
191
22
23
5
48
1.71
150297--150375
34
2.3
35
86
6
117
17
12
10
59
1.60

Tables:   1

The End!