Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015063.1 Kokia drynarioides strain JFW-HI SEQ_130107, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43438

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5020--5210
98
1.9
98
84
8
255
39
13
18
28
1.89
5488--5641
30
5.1
30
81
1
148
33
1
27
37
1.65
5512--5659
60
2.5
59
84
4
181
31
0
29
39
1.62
5488--5659
90
1.9
91
83
3
222
33
1
27
38
1.64
5516--5659
30
4.8
29
78
5
153
31
0
27
39
1.62
6247--6280
17
2.0
17
88
0
50
55
8
0
35
1.31
15267--15314
25
2.0
25
84
12
64
52
14
8
25
1.69
16267--16305
17
2.3
17
86
0
51
12
2
5
79
1.00
19546--19754
104
2.0
104
96
0
382
40
9
5
44
1.60
27496--27546
24
2.1
24
85
0
66
25
9
9
54
1.63
29486--29560
24
3.1
24
86
0
96
22
12
10
54
1.67
31455--31667
95
2.2
95
100
0
426
35
20
19
24
1.95
31906--31969
9
7.2
9
73
19
55
48
20
7
23
1.75
31925--31964
19
2.0
20
90
4
64
52
22
7
17
1.69
31927--31967
10
4.2
10
81
6
57
53
19
9
17
1.70
33028--33077
22
2.3
22
79
6
57
32
4
10
54
1.52
33036--33076
21
1.9
22
85
5
57
31
4
9
53
1.55

Tables:   1

The End!