Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015071.1 Kokia drynarioides strain JFW-HI SEQ_130115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42785

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3306--3366
30
2.0
30
87
0
86
32
11
18
37
1.86
4143--4185
17
2.5
17
96
0
77
23
4
20
51
1.66
4494--4551
4
15.0
4
72
13
50
55
0
0
44
0.99
4498--4553
7
7.4
7
78
13
58
57
0
0
42
0.99
4499--4553
24
2.4
24
76
11
62
58
0
0
41
0.98
4497--4559
31
2.0
31
100
0
126
53
0
0
46
1.00
4545--4581
18
2.0
19
94
5
67
62
0
0
37
0.96
14141--14169
14
2.0
15
93
6
51
44
13
0
41
1.44
18752--18824
22
3.5
20
72
9
56
21
15
1
61
1.41
18764--18822
14
4.1
14
76
4
64
22
10
1
66
1.31
18770--18829
29
2.1
28
81
3
66
25
13
1
60
1.43
18954--19052
50
2.0
50
89
0
153
42
1
4
52
1.27
19296--19506
106
2.0
105
97
0
386
22
16
33
27
1.95
21646--21703
31
1.9
30
82
6
73
32
0
17
50
1.46
21863--22007
31
4.5
32
71
16
113
44
12
6
35
1.69
21878--22027
68
2.2
68
97
0
282
42
14
6
37
1.71
26724--27650
461
2.0
460
95
0
1667
31
14
22
31
1.94
34369--34978
302
2.0
302
99
0
1193
25
15
19
39
1.90
37373--37414
14
2.8
15
75
10
50
50
0
0
50
1.00
37998--38054
29
2.0
29
86
3
80
22
14
7
56
1.62
42025--42082
15
3.8
15
81
6
64
34
0
1
63
1.04

Tables:   1

The End!