Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015072.1 Kokia drynarioides strain JFW-HI SEQ_130116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  142393

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3215--3359
61
2.4
61
79
0
164
40
13
4
42
1.63
7826--7850
10
2.5
10
100
0
50
60
0
0
40
0.97
14962--15224
132
2.0
131
87
4
377
47
11
11
29
1.74
18343--18379
4
9.2
4
100
0
74
27
0
24
48
1.51
22393--22455
28
2.2
29
77
8
76
26
6
14
52
1.65
24439--24486
16
3.0
16
78
9
53
39
0
0
60
0.97
25272--25325
27
2.0
28
81
3
65
38
3
5
51
1.43
27975--28020
4
11.5
4
80
0
56
43
21
4
30
1.72
32086--32146
24
2.5
25
73
7
63
54
1
1
42
1.20
35703--35752
19
2.7
19
82
17
61
58
4
0
38
1.17
35808--35902
23
3.9
23
74
15
68
58
2
1
37
1.17
35849--35891
17
2.4
18
76
3
52
65
0
2
32
1.06
35996--36060
29
2.2
30
83
8
89
33
4
0
61
1.16
35996--36060
33
2.0
33
84
6
87
33
4
0
61
1.16
41606--41652
23
2.0
23
84
8
60
29
0
4
65
1.11
51442--51482
21
1.9
22
85
5
57
39
2
7
51
1.43
62955--63007
18
3.1
17
86
7
72
64
0
0
35
0.94
66964--67027
31
2.1
31
100
0
128
37
6
6
50
1.53
71070--71117
24
2.0
24
100
0
96
37
12
16
33
1.86
75582--75640
31
2.0
30
86
6
84
42
10
11
35
1.76
82690--82775
43
2.0
43
100
0
172
20
20
11
46
1.82
83953--83979
3
9.0
3
100
0
54
0
33
0
66
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88833--88858
3
8.7
3
100
0
52
69
30
0
0
0.89
91745--91789
14
3.3
15
76
20
53
26
0
6
66
1.16
93793--93838
24
2.0
22
83
8
56
26
4
2
67
1.21
95753--95849
50
1.9
50
95
0
176
37
17
7
38
1.78
98230--98287
30
2.0
29
86
3
80
32
0
6
60
1.23
101747--101783
6
6.2
6
90
0
56
13
35
0
51
1.41
102952--103035
34
2.6
32
81
7
105
7
7
21
64
1.43
102972--103100
12
11.1
12
72
6
95
6
3
23
65
1.34
102972--103098
23
5.5
24
79
6
145
7
3
23
65
1.35
102971--103096
35
3.6
35
79
1
137
7
4
23
65
1.37
104913--104959
20
2.4
20
79
10
53
55
10
0
34
1.35
110127--110202
31
2.5
30
82
6
82
35
7
11
44
1.70
110150--110207
29
2.0
29
83
6
73
29
6
15
48
1.71
121331--121392
24
2.6
24
97
2
117
58
3
3
35
1.31
121567--121668
20
5.2
20
68
11
59
38
31
8
21
1.84
128815--129416
63
9.2
62
79
13
567
31
8
12
48
1.70
128876--129409
64
8.0
70
80
14
383
32
8
11
47
1.69
128946--129416
136
3.6
130
81
11
472
33
7
12
46
1.69
128830--129430
136
4.6
131
77
13
449
30
8
11
49
1.69
133790--133827
18
2.1
19
85
5
51
63
2
0
34
1.09

Tables:   1

The End!