Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015073.1 Kokia drynarioides strain JFW-HI SEQ_130117, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106010

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4610--4697
31
2.9
30
73
8
79
37
10
10
42
1.73
6327--6351
13
1.9
13
100
0
50
52
16
0
32
1.44
8366--8427
31
2.1
27
78
16
70
35
3
9
51
1.51
8368--8433
29
2.2
31
83
5
91
33
4
9
53
1.53
8369--8445
29
2.6
28
82
10
82
32
3
11
51
1.56
15216--15249
18
1.9
18
88
5
52
29
0
5
64
1.17
15314--15367
23
2.4
23
81
9
67
57
5
5
31
1.45
21212--21240
2
14.5
2
100
0
58
51
0
48
0
1.00
21942--21981
19
2.1
19
90
0
62
75
0
0
25
0.81
24830--24876
21
2.2
22
85
11
62
57
2
2
38
1.23
36269--36362
46
2.0
46
100
0
188
40
21
8
29
1.83
42929--42981
26
2.0
27
88
3
81
43
3
5
47
1.45
46144--46198
24
2.2
24
96
3
101
41
3
3
50
1.37
48314--48529
71
3.0
71
97
0
414
27
11
25
35
1.90
51220--51411
100
1.9
100
90
2
305
40
16
20
22
1.91
55398--55437
20
2.0
20
90
4
64
57
7
5
30
1.48
56436--56506
3
23.0
3
75
5
52
53
4
2
39
1.35
56572--56726
75
2.1
75
96
1
285
17
32
24
25
1.96
62405--62439
17
2.0
18
88
5
54
28
0
0
71
0.86
62405--62440
9
3.9
9
88
3
54
30
0
0
69
0.89
66747--66811
29
2.2
30
83
5
78
47
3
4
44
1.39
70103--70140
19
2.0
20
89
5
60
65
0
7
26
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
70083--70154
29
2.4
29
79
6
74
65
2
11
20
1.37
75262--75288
3
9.0
3
100
0
54
33
33
0
33
1.58
87596--87653
28
2.0
28
83
9
73
56
3
5
34
1.38
89928--89970
22
2.0
22
86
9
61
62
0
2
34
1.08
91089--91113
2
12.5
2
100
0
50
48
0
0
52
1.00
94922--94964
3
14.7
3
90
4
70
67
0
2
30
1.03
103192--103216
2
12.5
2
100
0
50
48
0
0
52
1.00
103835--103881
15
3.2
15
78
6
60
38
2
0
59
1.09
103834--103879
14
3.2
14
78
6
56
39
2
0
58
1.10
104631--104660
2
15.0
2
92
0
51
46
0
0
53
1.00

Tables:   1

The End!