Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015074.1 Kokia drynarioides strain JFW-HI SEQ_130118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  89674

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16085--16158
11
6.5
11
70
6
58
21
4
5
68
1.26
16279--16326
22
2.3
20
75
10
51
25
0
4
70
1.04
29658--29682
7
3.6
7
100
0
50
48
0
28
24
1.52
29665--29719
24
2.3
24
90
0
83
45
0
36
18
1.49
32036--32069
16
2.1
17
88
5
52
20
20
0
58
1.39
48734--48783
24
2.1
23
85
3
64
28
8
0
64
1.22
50359--50393
18
2.0
17
88
5
52
8
11
17
62
1.52
56153--56343
51
3.7
51
89
0
256
33
14
21
29
1.94
58246--58293
21
2.3
21
88
0
78
27
22
35
14
1.93
60992--61169
30
6.0
30
85
4
184
34
2
20
42
1.67
61030--61186
30
5.3
29
84
7
88
33
1
21
43
1.63
62717--63083
39
9.3
39
71
13
236
25
18
24
31
1.98
62717--63156
79
5.6
79
87
1
567
25
18
24
31
1.98
62717--63152
237
1.8
237
87
1
640
25
18
24
31
1.98
63202--63346
50
2.9
50
83
5
184
20
24
19
35
1.96
63770--63988
112
2.0
112
90
0
348
40
13
19
27
1.88
64297--64353
20
2.8
20
79
12
71
0
22
0
77
0.77
64293--64364
27
2.7
25
80
16
83
0
20
0
79
0.74
64300--64359
8
7.5
8
78
15
54
0
21
0
78
0.75
68617--68767
61
2.5
61
81
5
182
33
3
21
40
1.72
68617--68775
30
5.3
31
76
10
150
34
4
22
38
1.74
68617--68786
61
2.8
57
74
12
146
34
4
20
40
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88398--88454
13
4.6
12
72
14
53
50
1
0
47
1.11

Tables:   1

The End!