Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015075.1 Kokia drynarioides strain JFW-HI SEQ_130119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  164298

Tables:   1   

This is table  1  of  1  ( 66 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16031--16077
19
2.5
20
75
10
53
36
0
8
55
1.31
23462--23505
22
2.0
21
82
4
52
52
6
2
38
1.41
36899--36950
4
12.8
4
79
18
54
78
0
3
17
0.89
41820--41879
28
2.1
28
87
0
84
31
10
25
33
1.89
42000--42268
29
9.2
30
75
13
215
34
3
26
35
1.73
42004--42272
57
4.6
57
77
11
246
34
3
26
35
1.73
41955--42268
58
5.4
57
78
8
233
35
3
24
35
1.74
41978--42259
30
9.7
30
73
12
137
35
3
25
35
1.72
43940--44038
17
5.8
17
73
8
76
50
6
8
35
1.57
45602--45651
21
2.3
20
80
12
55
70
2
16
12
1.26
47947--47992
20
2.3
20
80
0
56
26
2
4
67
1.21
52292--52323
10
3.2
10
95
0
55
31
12
18
37
1.88
52990--53041
20
2.7
20
81
3
61
67
1
0
30
1.02
52990--53048
20
3.0
20
80
5
57
64
3
0
32
1.10
53069--53183
10
11.9
10
68
18
57
64
0
4
30
1.19
53094--53183
31
2.9
30
77
9
92
64
1
3
31
1.17
53407--53454
23
2.1
23
84
0
60
22
2
4
70
1.15
67447--67496
21
2.4
21
93
0
82
22
6
16
56
1.62
71211--71249
14
2.7
15
80
8
53
56
10
7
25
1.59
71740--71773
13
2.6
13
85
0
50
58
11
0
29
1.33
73491--73628
69
2.0
69
98
0
267
36
16
18
28
1.93
79345--79656
154
2.0
154
98
0
597
29
15
23
32
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85639--85705
26
2.5
27
97
2
127
23
26
14
34
1.94
88092--88141
18
2.7
19
75
6
50
30
0
2
68
1.01
89563--89605
17
2.5
17
78
14
52
60
6
0
32
1.23
90877--90920
23
2.0
22
86
4
61
52
2
0
45
1.13
92571--92617
12
3.5
13
78
16
51
27
2
0
70
0.99
94100--94173
38
1.9
38
97
0
139
25
36
20
17
1.94
96869--96922
24
2.3
24
75
12
60
40
1
1
55
1.21
97335--97359
13
1.9
13
100
0
50
52
48
0
0
1.00
98985--99022
20
1.9
20
88
0
58
21
10
18
50
1.76
102767--102792
7
3.7
7
100
0
52
30
0
15
53
1.42
106749--106780
17
1.9
17
93
6
57
78
12
3
6
1.06
111967--111991
8
3.1
8
100
0
50
16
0
24
60
1.36
112507--112548
21
2.0
21
86
4
59
69
0
0
30
0.89
122431--122821
61
6.5
58
75
10
267
31
15
15
37
1.90
122446--122869
120
3.5
119
78
10
375
32
16
14
37
1.89
122474--122869
60
6.5
61
77
8
316
32
15
14
37
1.88
122593--122895
122
2.5
120
82
7
346
31
17
14
36
1.90
122477--122926
61
7.4
60
73
14
252
31
15
14
38
1.88
122642--122925
122
2.3
120
80
7
313
29
16
13
40
1.87
123760--123814
17
3.5
17
71
19
64
60
3
12
23
1.49
123752--123829
30
2.6
30
91
2
120
61
2
8
26
1.39
123776--123857
30
2.7
30
86
0
101
64
3
4
26
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
127656--128203
119
4.6
122
79
9
378
37
15
17
29
1.91
127656--128222
60
9.4
58
77
6
429
37
16
17
28
1.92
129034--129077
16
2.8
16
79
3
54
63
0
2
34
1.07
130455--130480
12
2.2
12
100
0
52
23
0
7
69
1.14
130475--130522
26
1.9
24
87
8
69
39
2
4
54
1.32
132084--132113
14
2.2
13
94
5
51
43
3
0
53
1.17
132204--132260
24
2.5
24
80
11
57
24
0
14
61
1.33
136504--137308
162
5.0
162
98
0
1520
38
26
16
18
1.91
139585--139634
22
2.3
22
89
0
73
72
4
0
24
1.02
139593--139637
14
3.1
15
74
25
51
73
4
0
22
1.01
139587--139638
15
3.5
15
75
17
54
71
3
0
25
1.03
156047--156077
16
2.0
16
93
6
55
25
0
3
70
1.02
158107--158186
27
3.0
27
81
9
92
51
10
18
20
1.74
160944--160975
8
4.0
8
100
0
64
0
12
25
62
1.30
161433--161472
17
2.4
17
87
8
55
47
2
0
50
1.14
161441--161486
23
2.0
23
87
8
67
50
0
0
50
1.00
163429--163554
29
4.3
28
78
8
112
34
27
0
37
1.63
163424--163549
58
2.2
58
86
4
182
34
26
0
38
1.57
163424--163583
58
2.8
56
81
9
178
33
28
1
36
1.68
163592--163696
30
3.5
30
67
19
74
33
23
8
34
1.85
163564--163702
60
2.3
59
90
2
215
31
27
8
32
1.87
163679--163746
29
2.3
30
77
7
77
33
29
8
27
1.87

Tables:   1

The End!