Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015077.1 Kokia drynarioides strain JFW-HI SEQ_130121, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92567

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3522--3569
20
2.4
20
86
6
62
8
25
22
43
1.81
6652--6720
29
2.4
29
81
9
72
49
0
1
49
1.09
7837--7877
20
2.0
20
85
4
55
56
17
4
21
1.60
9969--10024
24
2.3
24
76
14
60
35
5
14
44
1.68
13208--13250
21
2.1
21
87
12
63
27
0
2
69
1.00
13208--13250
20
2.2
19
87
8
59
27
0
2
69
1.00
37559--37635
23
3.3
24
89
7
106
15
19
23
41
1.89
37777--37931
78
2.0
78
94
2
276
49
3
21
25
1.65
41234--41306
27
2.8
28
74
19
84
47
8
1
42
1.41
41237--41306
25
2.7
27
77
6
81
48
8
1
41
1.42
65497--65607
56
2.0
56
100
0
222
45
9
22
23
1.81
67261--67290
2
15.0
2
92
0
51
53
0
0
46
1.00
69221--69452
59
4.0
59
75
15
207
38
3
25
32
1.71
69221--69419
59
3.4
58
78
12
212
38
2
26
32
1.70
69221--69435
29
7.4
29
74
16
153
38
3
26
31
1.72
69382--69481
29
3.4
29
80
10
105
36
4
23
37
1.73
76272--76486
58
3.7
55
85
6
259
36
3
27
33
1.73
76272--76489
28
7.7
26
72
19
129
37
3
27
32
1.73
76296--76486
58
3.4
57
91
2
287
34
3
27
34
1.75
76330--76536
30
7.2
29
76
14
133
37
2
26
33
1.71
76292--76547
114
2.2
116
80
8
272
36
3
26
34
1.72
76451--76555
30
3.6
29
82
5
122
39
0
20
39
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77628--77684
21
2.8
21
74
12
55
36
3
1
57
1.26
77643--77719
36
2.2
34
80
11
86
42
3
2
50
1.34
77671--77699
15
1.9
15
100
0
58
48
3
0
48
1.18
78452--78508
6
9.8
6
83
7
73
50
3
0
45
1.18
78450--78490
11
3.6
11
83
6
55
48
2
0
48
1.14
78433--78508
23
3.3
23
81
5
91
51
2
1
44
1.23
78453--78524
11
6.3
12
77
6
53
55
4
0
40
1.19
78476--78519
17
2.6
17
88
0
70
59
4
0
36
1.18
81134--81268
21
6.7
20
70
14
64
71
19
5
3
1.20
81208--81307
40
2.5
42
74
22
117
71
20
6
3
1.21
81216--81268
17
3.1
17
84
10
65
77
16
3
1
1.01
81963--81996
16
2.1
16
88
0
50
41
11
2
44
1.56
88271--88412
70
2.0
71
86
1
196
51
16
17
14
1.77
89126--89337
106
2.0
106
100
0
424
20
19
20
38
1.93

Tables:   1

The End!