Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015078.1 Kokia drynarioides strain JFW-HI SEQ_130122, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43575

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1662--1698
18
2.1
17
90
5
56
64
8
0
27
1.21
1708--1751
21
2.1
21
87
4
63
34
2
0
63
1.07
1794--1947
84
1.8
84
84
2
211
35
11
17
36
1.85
5698--5894
59
3.3
59
90
2
297
31
10
6
52
1.60
8334--8556
43
5.2
43
86
3
252
34
12
26
26
1.92
10275--10500
120
1.9
120
86
0
326
25
24
18
31
1.97
16450--16563
31
3.4
31
66
19
84
48
4
10
36
1.58
16436--16580
71
2.0
71
100
0
290
48
4
9
37
1.55
24425--24483
31
2.0
30
83
12
77
45
13
8
32
1.74
24420--24486
29
2.3
27
79
18
73
43
11
8
35
1.73
33122--33267
73
2.0
73
97
0
274
44
8
15
30
1.77
36825--36927
42
2.5
42
85
0
134
26
17
19
36
1.94
40796--40841
24
1.9
23
86
8
65
54
6
4
34
1.46
40907--40940
13
2.6
13
85
0
50
58
14
0
26
1.36
42850--42892
14
2.9
14
86
6
50
79
0
0
20
0.74
42863--42906
10
4.1
10
91
8
61
77
0
2
20
0.88
42863--42906
22
2.0
21
91
4
70
77
0
2
20
0.88

Tables:   1

The End!