Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015080.1 Kokia drynarioides strain JFW-HI SEQ_130124, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  129931

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9859--9887
5
5.8
5
100
0
58
58
41
0
0
0.98
11668--11694
6
4.5
6
100
0
54
14
14
70
0
1.17
26606--26656
7
7.0
7
89
8
75
41
13
45
0
1.44
26606--26649
23
2.0
22
91
8
63
40
15
43
0
1.47
26606--26671
30
2.2
29
86
5
87
45
13
40
0
1.44
26716--26746
7
4.4
7
95
0
53
29
67
0
3
1.06
36717--36786
31
2.3
31
78
9
81
25
5
7
61
1.44
37333--37416
42
2.0
42
100
0
168
30
28
16
23
1.96
37701--37736
3
12.0
3
100
0
72
0
33
0
66
0.92
40960--41091
65
2.0
65
88
5
196
45
3
18
32
1.67
41246--41298
18
3.2
17
77
17
51
20
1
18
58
1.49
47020--47049
15
2.0
15
93
0
51
36
0
33
30
1.58
48216--48344
23
5.4
23
84
5
152
44
21
22
11
1.84
48191--48344
48
3.2
43
76
18
130
42
21
23
12
1.86
48219--48343
25
5.2
25
77
16
113
44
20
23
12
1.85
53039--53095
27
2.1
28
86
3
80
40
1
1
56
1.20
53158--53184
10
2.7
10
100
0
54
22
29
18
29
1.97
53899--54107
115
1.8
115
87
0
310
20
17
22
39
1.92
56621--56655
14
2.5
13
90
9
52
57
0
28
14
1.38
66318--66393
21
3.6
21
75
19
61
63
3
0
32
1.13
66316--66421
11
10.9
9
68
18
54
62
3
0
33
1.13
88163--88224
31
2.0
31
100
0
124
29
22
9
38
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88659--88690
2
16.0
2
100
0
64
50
0
0
50
1.00
98413--98464
21
2.5
21
84
3
61
57
1
3
36
1.28
99525--99606
43
1.9
43
89
0
128
46
17
12
24
1.82
102212--102251
21
1.9
21
85
10
55
32
45
5
17
1.70
105907--105938
2
16.0
2
100
0
64
50
0
0
50
1.00
106350--106393
20
2.3
19
84
7
61
45
4
0
50
1.22
119383--119452
32
2.2
32
87
5
97
50
2
14
32
1.58
119382--119436
16
3.4
16
84
0
74
50
5
12
30
1.63
119383--119452
16
4.4
16
81
0
59
50
2
14
32
1.58
119534--119558
10
2.5
10
100
0
50
92
0
0
8
0.40
119628--119681
21
2.6
21
74
8
58
53
14
9
22
1.69
129330--129372
4
10.8
4
81
18
54
74
0
25
0
0.82
129319--129375
21
2.6
21
81
13
62
71
0
26
1
0.95
129319--129375
11
4.9
11
81
12
60
71
0
26
1
0.95
129369--129405
18
2.2
16
90
9
56
54
0
43
2
1.14
129755--129796
20
2.0
22
86
9
61
23
2
14
59
1.47

Tables:   1

The End!