Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015081.1 Kokia drynarioides strain JFW-HI SEQ_130125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  135913

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2599--2654
24
2.2
24
85
14
78
37
3
5
53
1.41
4429--4491
31
2.0
31
84
6
81
47
6
4
41
1.50
30766--30843
33
2.3
34
84
4
104
46
1
1
51
1.17
31622--31662
21
2.0
21
90
9
66
53
17
9
19
1.70
31616--31702
22
3.9
23
75
10
74
55
17
12
14
1.70
43010--43104
45
2.1
46
92
2
156
52
6
12
28
1.63
43658--43723
21
3.0
21
75
18
64
43
3
0
53
1.16
44772--44796
2
12.5
2
100
0
50
52
0
0
48
1.00
57522--57573
20
2.6
21
72
6
54
34
17
0
48
1.48
58490--58541
24
2.2
24
96
0
95
17
38
7
36
1.78
61845--61879
2
17.0
2
94
5
61
48
2
0
48
1.16
61879--61907
2
14.5
2
100
0
58
51
0
48
0
1.00
62449--62486
16
2.3
17
86
4
51
50
5
0
44
1.24
64605--64644
21
1.9
21
85
10
55
17
10
0
72
1.11
65626--65680
20
2.8
20
86
2
67
65
1
5
27
1.25
65645--65736
29
3.1
28
76
17
98
63
3
2
31
1.23
66155--66454
90
3.3
90
89
1
440
29
8
23
39
1.84
66587--66632
16
3.1
15
77
20
51
47
0
0
52
1.00
76601--76663
20
3.2
20
76
14
58
47
6
0
46
1.28
76608--76649
21
1.9
23
90
9
70
54
4
0
40
1.21
77215--77277
28
2.2
28
84
13
85
53
4
1
39
1.31
95520--95559
19
2.1
19
95
0
71
22
15
7
55
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95520--95566
19
2.5
19
89
0
58
23
12
8
55
1.64
99671--99708
18
2.1
18
85
9
51
63
2
0
34
1.09
101648--101677
12
2.5
12
100
0
60
56
0
10
33
1.32
114102--114399
158
1.9
158
90
0
479
30
24
24
21
1.99
126135--126176
13
2.9
14
80
13
50
54
0
0
45
0.99
126139--126175
16
2.3
16
86
13
58
59
0
0
40
0.97
126214--126261
15
2.9
15
77
17
51
54
2
0
43
1.12
126951--126988
14
2.8
14
84
4
51
60
0
0
39
0.97
130702--130731
15
2.0
15
93
0
51
60
3
23
13
1.48
134178--134222
19
2.4
20
75
14
51
55
11
11
22
1.66
134737--134857
59
2.1
58
87
1
170
33
0
18
47
1.48

Tables:   1

The End!