Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015097.1 Kokia drynarioides strain JFW-HI SEQ_130141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  157143

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
593--683
29
3.2
29
62
20
73
43
19
3
32
1.67
571--685
57
2.0
57
100
0
230
46
19
3
31
1.66
586--674
28
3.1
28
62
25
69
46
22
3
28
1.68
830--865
18
1.9
18
88
5
54
55
30
2
11
1.49
2448--2480
14
2.3
15
89
5
50
33
3
6
57
1.38
5021--5048
2
14.0
2
100
0
56
50
0
0
50
1.00
5174--5218
23
2.0
23
82
8
56
37
11
11
40
1.76
8539--8606
34
2.0
34
97
0
127
14
25
7
52
1.67
18764--18827
29
2.2
29
91
2
103
26
12
28
32
1.93
18899--19185
58
4.9
58
85
4
335
39
1
26
32
1.65
18812--18975
90
1.8
90
82
5
215
38
2
24
34
1.69
18812--19470
29
22.5
30
68
15
274
39
2
24
33
1.68
18850--19185
59
5.7
58
81
6
340
38
1
25
34
1.65
19167--19352
57
3.2
56
79
3
156
41
3
21
32
1.71
19167--19513
59
6.0
57
77
7
288
41
2
21
34
1.66
20986--21052
11
6.2
11
73
15
59
56
1
0
41
1.08
21017--21067
6
8.8
6
78
8
52
58
1
0
39
1.09
21003--21068
29
2.5
25
77
15
69
62
1
0
36
1.05
21024--21067
17
2.6
18
92
7
74
61
0
0
38
0.96
23293--23621
32
10.4
32
81
5
330
32
16
17
32
1.93
23301--23621
95
3.4
96
84
4
393
33
16
17
32
1.93
29431--29529
17
5.8
17
80
2
110
39
1
4
55
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29433--29529
6
17.0
6
71
10
69
39
1
4
55
1.26
29433--29529
11
8.5
11
73
14
81
39
1
4
55
1.26
29434--29529
23
4.2
23
77
5
79
39
1
4
55
1.26
31044--31409
59
6.3
57
79
9
359
35
22
2
39
1.69
31048--31412
30
12.5
30
77
10
330
36
22
3
38
1.70
35331--35367
18
2.1
18
100
0
74
40
10
21
27
1.86
40536--40568
3
11.0
3
93
0
57
69
0
30
0
0.88
42812--43175
39
9.3
39
71
4
266
24
32
18
25
1.97
42807--43175
78
4.7
78
89
0
513
24
31
18
25
1.97
42809--43156
117
3.0
117
74
3
304
23
31
19
25
1.98
43719--43785
17
3.9
17
84
0
89
38
1
2
56
1.24
45332--45724
29
13.5
29
81
3
367
35
22
3
38
1.73
45331--45724
59
6.8
59
81
2
386
35
22
3
38
1.72
45332--45723
88
4.5
89
81
4
431
35
22
3
38
1.72
47656--47844
96
2.0
96
82
6
231
37
13
19
29
1.90
48268--48547
30
9.5
30
79
9
256
32
3
29
34
1.74
48226--48545
59
5.4
59
83
7
364
34
3
27
34
1.74
48226--48545
29
10.8
30
79
7
298
34
3
27
34
1.74
49657--49698
3
14.0
3
80
9
50
38
2
0
59
1.10
50432--50513
6
14.2
6
74
7
71
50
1
2
46
1.22
50432--50539
17
6.4
17
79
7
121
51
1
1
44
1.22
50450--50506
23
2.4
23
82
2
60
50
1
3
43
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50465--50509
23
2.0
23
90
0
72
48
2
2
46
1.26
55591--55642
20
2.6
21
81
9
63
51
9
9
28
1.66
56435--56490
3
18.7
3
96
0
103
67
1
0
30
1.01
59477--59553
7
11.0
7
100
0
154
14
28
14
42
1.84
65734--65778
19
2.3
19
84
3
54
51
0
8
40
1.33
69962--70050
22
4.0
22
74
11
65
22
6
5
65
1.38
69941--70041
11
9.3
11
70
14
66
18
8
3
68
1.32
73199--73231
2
16.5
2
100
0
66
51
0
0
48
1.00
77497--77545
23
2.1
23
85
7
64
67
2
2
28
1.13
91971--92026
17
3.2
17
87
2
76
37
1
1
58
1.19
93841--94133
29
10.0
29
75
14
221
36
26
2
34
1.70
93864--94097
61
4.0
61
77
10
156
36
27
2
33
1.71
100592--100657
27
2.4
27
87
0
87
19
28
31
19
1.97
100727--100797
32
2.3
30
77
13
81
66
8
0
25
1.20
100967--101016
20
2.4
21
75
18
52
30
4
2
64
1.23
101343--101383
16
2.6
16
88
0
55
39
0
0
60
0.96
104519--104592
31
2.4
30
84
2
94
47
2
9
40
1.50
114326--114375
26
1.9
26
87
0
73
48
12
12
28
1.76
136903--136964
22
2.8
22
73
9
54
43
0
1
54
1.09
138662--138690
6
4.8
6
100
0
58
86
0
13
0
0.58

Tables:   1

The End!