Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015107.1 Kokia drynarioides strain JFW-HI SEQ_130151, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  118470

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5650--5679
2
15.0
2
100
0
60
50
0
50
0
1.00
9015--9044
15
2.0
15
100
0
60
33
40
13
13
1.83
9161--9189
3
9.7
3
100
0
58
31
34
0
34
1.58
9389--9428
21
1.9
21
85
10
55
25
35
5
35
1.78
11517--11698
92
2.0
91
89
1
274
25
13
22
38
1.90
15047--15097
23
2.2
23
96
0
93
41
23
23
11
1.87
15187--15234
24
1.9
26
84
16
66
31
22
0
45
1.53
18667--18733
24
2.8
24
86
0
89
26
8
8
55
1.61
18947--18988
21
2.0
21
86
13
61
21
30
9
38
1.85
20312--20350
7
5.6
7
100
0
78
28
25
30
15
1.96
39974--40027
25
2.2
25
83
6
65
22
11
5
61
1.50
40404--40470
25
2.6
26
80
2
73
17
2
5
73
1.17
41003--41049
24
1.9
25
82
4
60
55
4
0
40
1.19
46709--46750
20
2.1
20
86
8
59
40
11
7
40
1.69
51025--51056
2
16.0
2
100
0
64
50
0
50
0
1.00
56538--56591
28
1.9
28
96
0
99
48
5
12
33
1.65
72679--72797
57
2.1
57
85
4
159
27
20
9
42
1.82
72959--73075
31
3.9
31
71
13
109
45
14
16
23
1.84
73009--73075
30
2.2
32
86
7
95
43
10
17
28
1.82
72959--73121
89
1.8
89
81
5
204
47
11
15
24
1.79
89013--89058
22
2.1
22
83
0
56
34
4
0
60
1.16
96455--96514
19
3.1
19
72
11
50
55
1
1
41
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96997--97164
64
2.6
65
83
4
218
34
11
10
44
1.74
100619--100651
10
3.3
10
91
8
50
63
0
9
27
1.24
100830--100886
27
2.1
27
83
6
71
36
1
0
61
1.07
100843--100887
20
2.2
20
88
7
65
35
0
0
64
0.94
105724--105774
19
2.7
19
80
11
61
56
5
1
35
1.35
108377--108435
26
2.3
27
88
5
77
28
1
1
67
1.10
109589--109623
18
1.9
18
94
0
61
0
45
5
48
1.26
118387--118470
23
4.0
23
70
20
83
44
22
21
11
1.85

Tables:   1

The End!