Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015108.1 Kokia drynarioides strain JFW-HI SEQ_130152, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43874

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4247--4399
59
2.6
59
80
7
143
26
15
8
49
1.73
4276--4399
59
2.1
59
82
8
146
27
15
7
50
1.70
5358--5414
27
2.0
29
86
6
82
29
0
5
64
1.15
5366--5422
28
2.1
27
80
9
62
35
0
3
61
1.13
6830--6999
87
2.0
87
88
2
252
34
33
18
13
1.90
9689--9717
6
4.8
6
100
0
58
34
0
17
48
1.47
10960--10998
21
1.9
20
89
5
60
56
0
5
38
1.22
12060--12161
40
2.5
40
91
1
168
47
9
9
33
1.70
12806--12840
15
2.3
15
85
0
52
45
37
2
14
1.59
17196--17235
21
1.9
21
84
0
53
67
0
5
27
1.11
19591--19661
3
23.7
3
85
0
97
61
35
2
0
1.10
24872--24918
24
2.0
22
88
8
67
53
4
0
42
1.20
24878--24923
11
4.0
11
85
5
56
58
6
0
34
1.24
25922--25959
20
1.9
20
84
10
51
7
5
23
63
1.42
25977--26101
12
10.9
11
69
16
51
10
3
16
69
1.29
25977--26038
23
2.6
25
76
16
62
11
3
16
69
1.31
25963--26082
55
2.2
55
82
10
140
10
3
16
69
1.31
26007--26074
32
2.1
32
91
0
109
11
1
14
72
1.20
26039--26082
23
1.9
23
85
0
61
11
4
15
68
1.36
26001--26114
55
2.1
55
83
3
140
9
2
17
70
1.26
26225--26319
49
2.0
47
83
8
120
27
0
8
64
1.22
26595--26641
10
4.6
10
75
15
51
34
0
2
63
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35750--35778
6
5.0
6
91
8
51
51
0
0
48
1.00
35880--35937
21
2.7
21
79
10
55
48
1
5
44
1.35
37484--37547
9
6.9
9
70
19
51
59
4
3
32
1.34
37500--37556
17
3.2
17
79
16
55
63
5
0
31
1.17
37482--37541
19
3.1
19
74
11
59
55
5
3
36
1.38
37582--37658
36
2.1
37
88
7
113
32
12
10
44
1.77
39755--39806
24
2.1
25
82
3
61
65
1
5
26
1.26
40304--40355
25
2.1
25
100
0
104
38
11
0
50
1.39

Tables:   1

The End!