Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015113.1 Kokia drynarioides strain JFW-HI SEQ_130157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106898

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6883--6961
38
2.1
38
100
0
158
27
10
15
46
1.77
22880--23008
64
2.0
65
93
1
224
44
11
7
36
1.70
28653--28692
19
2.2
19
90
4
64
30
25
20
25
1.99
30263--30291
6
4.8
6
100
0
58
51
0
13
34
1.42
44596--44640
20
2.2
20
88
4
63
55
2
4
37
1.32
50342--50372
16
1.9
16
93
0
53
25
0
0
74
0.82
50713--50778
27
2.4
28
82
5
80
53
33
0
13
1.41
52676--52718
11
3.8
11
80
17
52
30
2
2
65
1.18
52679--52722
23
1.9
23
90
0
70
31
2
4
61
1.28
58218--58281
21
3.0
21
72
14
60
60
0
1
37
1.06
64661--64697
18
2.1
18
90
5
58
18
16
29
35
1.93
65918--66045
7
19.0
7
74
15
101
17
15
23
43
1.87
65916--66047
27
4.9
27
79
8
119
16
15
22
44
1.86
65917--66030
20
5.7
20
75
8
106
16
15
24
42
1.87
65954--66047
20
4.7
19
76
7
89
18
17
20
44
1.87
67158--67212
22
2.5
22
85
8
67
20
0
20
60
1.37
73052--73149
20
4.9
20
80
3
99
19
18
19
42
1.89
73068--73138
27
2.6
27
84
4
81
19
16
21
42
1.89
73055--73149
40
2.4
40
82
3
120
20
16
18
44
1.87
73529--73615
7
12.3
7
77
7
59
47
27
1
24
1.59
73596--73834
68
3.6
68
82
7
285
48
23
1
27
1.59
73672--73709
16
2.4
17
83
16
55
55
23
0
21
1.44
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
73596--73834
133
1.8
133
83
4
322
48
23
1
27
1.59
78273--78309
18
2.1
18
94
0
65
51
0
24
24
1.49
78273--78309
12
3.1
12
84
0
56
51
0
24
24
1.49
80274--80551
52
5.4
52
83
3
319
34
24
14
27
1.93
82943--83129
57
3.2
58
79
10
154
38
2
23
35
1.69
82916--83249
29
11.6
29
76
11
226
37
2
25
34
1.71
93834--94325
30
16.6
30
72
14
184
32
31
4
32
1.78
93864--94331
176
2.6
176
90
2
733
31
32
4
31
1.78
93864--94332
59
8.0
59
91
3
723
31
32
4
31
1.78
105404--105457
27
2.0
26
92
3
90
16
22
7
53
1.67
105939--106399
207
2.2
205
84
3
577
35
21
22
19
1.96
106247--106531
158
1.8
157
88
0
435
37
17
26
19
1.93
106679--106738
17
3.5
17
82
8
77
41
1
1
55
1.20
106678--106774
17
5.6
18
75
10
76
43
2
2
52
1.24
106678--106776
6
17.0
6
68
15
57
44
2
2
51
1.24
106678--106781
34
3.0
35
83
7
113
46
1
1
50
1.23

Tables:   1

The End!