Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015114.1 Kokia drynarioides strain JFW-HI SEQ_130158, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40916

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3529--3563
13
2.7
13
100
0
70
5
22
5
65
1.36
5579--5652
37
2.0
37
100
0
148
40
10
27
21
1.86
5796--5867
31
2.3
31
92
0
117
26
19
11
43
1.84
10708--10816
50
2.2
50
81
3
130
34
17
23
23
1.96
10736--10832
50
1.9
50
83
4
124
37
14
24
23
1.92
10894--11121
40
5.7
40
82
3
219
36
21
13
28
1.91
10894--11082
80
2.4
79
87
0
261
38
20
12
29
1.89
10937--11201
80
3.3
80
83
5
279
33
24
15
26
1.95
10873--11477
120
5.1
120
72
8
314
32
24
16
26
1.96
11053--11558
40
12.8
40
76
4
425
31
26
17
24
1.97
10864--11557
79
8.7
79
81
3
527
32
25
16
25
1.96
11053--11556
119
4.2
120
72
7
366
31
26
17
24
1.97
10893--11557
40
16.8
39
73
7
191
33
24
16
25
1.96
11933--12109
59
2.8
63
85
9
263
44
0
3
51
1.22
25939--25972
16
2.1
16
88
0
50
23
0
11
64
1.26
27371--27403
2
16.5
2
100
0
66
48
0
0
51
1.00
27666--27759
44
2.1
46
86
7
131
31
3
27
37
1.73
27891--27973
38
2.2
39
86
6
116
45
2
2
49
1.28
36836--36990
84
1.8
84
81
12
192
51
8
0
39
1.37
37066--37102
14
2.7
13
88
12
56
72
13
2
10
1.21
38273--38355
22
3.8
21
76
7
76
7
6
19
67
1.36
38376--38430
12
4.6
12
95
0
101
9
0
16
74
1.06

Tables:   1

The End!