Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015126.1 Kokia drynarioides strain JFW-HI SEQ_130170, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  171399

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11748--11806
18
3.5
17
80
11
59
47
3
0
49
1.18
12039--12076
18
2.2
17
86
13
51
65
0
0
34
0.93
16100--16210
42
2.6
42
95
0
195
23
22
7
46
1.76
29036--29419
194
2.0
196
90
3
605
23
16
18
41
1.89
38503--38856
178
2.0
178
96
1
647
36
12
10
41
1.77
50016--50040
2
12.5
2
100
0
50
52
0
0
48
1.00
56787--56821
2
17.0
2
94
5
61
48
2
0
48
1.16
63666--63705
21
1.9
21
84
0
53
45
2
0
52
1.14
78797--78835
20
2.0
20
85
10
53
38
5
0
56
1.22
90113--90143
6
5.2
6
96
0
53
38
16
0
45
1.47
90294--90318
6
4.2
6
100
0
50
84
0
0
16
0.63
102362--102431
31
2.3
31
85
5
88
38
15
12
32
1.86
123330--123448
28
4.0
28
87
12
184
47
6
11
34
1.67
123321--123448
62
2.1
62
100
0
256
44
7
12
35
1.71
124431--124478
21
2.3
22
85
7
64
22
4
29
43
1.72
128264--128346
43
1.9
43
95
0
148
51
12
18
18
1.75
133495--133525
14
2.2
14
100
0
62
29
0
12
58
1.35
134190--134277
35
2.5
35
78
10
99
31
10
19
38
1.85
134218--134270
23
2.3
23
83
6
63
30
9
22
37
1.86
136192--136479
91
3.2
88
72
12
225
33
7
14
44
1.73
139342--139451
54
2.0
55
98
1
213
23
14
16
45
1.84
144750--144960
105
2.0
105
81
3
246
27
13
33
26
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144633--145083
222
2.0
225
85
5
617
26
14
32
26
1.95
144851--145255
123
3.3
121
82
3
463
26
14
30
28
1.95
145504--145617
60
1.9
60
83
3
149
38
7
7
46
1.60
151139--151222
36
2.3
36
77
6
89
4
46
0
48
1.23
151211--151259
24
2.1
24
85
7
66
2
48
4
44
1.33
151202--151259
22
2.5
22
80
5
62
3
46
3
46
1.36
160332--161058
206
3.5
209
90
1
1129
38
21
11
28
1.88
160332--161058
209
3.5
206
89
2
1105
38
21
11
28
1.88
161362--161409
22
2.2
22
88
0
69
29
4
16
50
1.64
162203--162246
3
15.0
3
80
4
54
63
2
29
4
1.26
162204--162248
23
2.1
21
88
12
65
66
2
26
4
1.22

Tables:   1

The End!