Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015128.1 Kokia drynarioides strain JFW-HI SEQ_130172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82894

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5346--5377
13
2.4
14
94
5
57
3
9
0
87
0.64
8392--8426
6
5.8
6
100
0
70
0
31
17
51
1.45
11839--12024
96
1.9
96
92
2
311
33
17
24
25
1.96
15635--15670
2
18.0
2
100
0
72
50
0
0
50
1.00
21027--21132
56
1.9
53
81
12
126
32
15
17
34
1.91
21513--21560
12
3.7
12
75
20
51
52
0
10
37
1.36
21655--21952
93
3.2
93
91
1
490
44
7
3
45
1.47
22867--23023
61
2.6
60
88
3
233
43
12
15
28
1.84
23032--23372
59
5.9
58
73
12
265
39
16
16
27
1.90
23037--23359
111
2.8
112
80
10
304
39
16
16
27
1.89
30293--30324
2
16.0
2
100
0
64
50
0
50
0
1.00
31777--31823
19
2.3
20
78
14
51
44
0
2
53
1.12
36105--36162
25
2.3
26
84
3
82
12
25
22
39
1.89
48222--48267
14
3.1
14
79
11
56
26
6
17
50
1.70
62167--62202
7
5.1
7
100
0
72
41
27
30
0
1.56
63631--63685
25
2.1
27
90
6
87
40
20
27
12
1.88
63672--63746
22
3.4
22
88
3
116
41
25
24
9
1.84
68074--68117
13
3.3
13
81
12
54
52
0
0
47
1.00
68148--68204
15
3.5
15
73
17
60
50
1
0
47
1.11
68846--68879
11
3.2
11
87
4
52
67
0
0
32
0.91
68871--68926
26
2.1
27
80
9
62
48
0
1
50
1.11
69636--69666
3
10.3
3
92
0
53
0
29
0
70
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75007--75060
24
2.4
22
84
6
63
37
0
3
59
1.15
78226--78276
13
3.9
13
79
7
59
41
17
5
35
1.74
78592--78637
24
1.9
24
86
8
67
21
17
0
60
1.35
79355--79481
23
5.4
23
82
12
136
42
22
23
11
1.86

Tables:   1

The End!