Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NTFQ01015134.1 Kokia drynarioides strain JFW-HI SEQ_130178, whole genome shotgun sequence Parameters: 2 7 7 80 10 50 1000 Length: 177399

Tables:   1   

This is table  1  of  1  ( 35 repeats found )
Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
17919--17948
12
2.5
12
88
0
51
23
0
43
33
1.54
18740--18776
17
2.2
17
90
4
58
10
2
2
83
0.84
19122--19272
82
1.8
82
90
2
241
29
8
9
51
1.65
24861--24893
11
2.9
11
95
4
57
36
9
18
36
1.82
30191--30243
25
2.1
25
82
6
63
32
1
11
54
1.47
58604--58776
23
7.4
23
75
10
122
12
19
22
45
1.83
60595--60649
26
2.2
24
84
9
67
40
0
7
52
1.29
60753--60794
5
8.4
5
87
7
59
76
0
23
0
0.79
76029--76064
14
2.6
14
86
0
54
33
2
0
63
1.08
76035--76094
24
2.5
23
82
15
61
33
6
0
60
1.23
77743--77798
29
1.9
29
88
0
85
42
0
0
57
0.99
79246--79285
10
4.3
9
84
15
55
77
2
10
10
1.08
82087--82241
80
1.9
80
90
0
247
27
18
12
42
1.85
85364--85408
22
2.1
22
87
4
65
33
0
4
62
1.15
85364--85410
21
2.2
21
85
7
60
34
0
4
61
1.15
92851--92878
6
4.7
6
100
0
56
0
14
0
85
0.59
95425--95462
16
2.5
15
91
4
58
76
0
0
23
0.79
117719--117781
32
2.0
32
90
0
99
23
6
25
44
1.77
131284--131347
32
2.0
32
87
6
94
25
7
23
43
1.80
131263--131454
96
2.0
97
93
1
332
26
9
19
44
1.82
132557--133530
503
1.9
505
97
0
1844
30
14
18
35
1.91
135175--135243
34
2.0
35
82
2
86
21
14
13
50
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149295--149329
6
6.0
6
96
3
63
17
51
0
31
1.45
150498--150579
31
2.7
30
79
9
85
48
10
15
24
1.77
152501--152528
13
2.2
13
100
0
56
21
32
7
39
1.80
157514--158147
84
7.6
84
84
2
713
17
31
10
40
1.83
160680--160709
12
2.5
12
94
0
51
53
0
3
43
1.17
165871--165901
13
2.4
13
94
0
53
22
9
0
67
1.19
168321--168387
29
2.3
29
79
5
73
19
1
23
55
1.52
168400--168510
14
7.8
14
71
12
66
17
1
28
52
1.55
168471--168509
15
2.8
13
88
11
51
12
0
35
51
1.40
168427--168509
29
2.8
29
73
12
71
16
2
30
50
1.58
168567--168635
21
3.2
20
82
10
84
10
2
30
56
1.47
173188--173242
12
4.6
12
93
0
56
38
0
49
12
1.41
173198--173243
6
7.7
6
95
0
83
36
0
47
15
1.45

Tables:   1   

The End!