Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015137.1 Kokia drynarioides strain JFW-HI SEQ_130181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  154352

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
753--790
13
2.9
13
92
0
67
21
10
7
60
1.54
1322--1355
17
2.0
17
88
0
50
52
0
0
47
1.00
11868--11959
46
2.0
46
100
0
184
23
19
21
34
1.96
14928--14985
31
1.9
30
85
3
80
43
10
8
37
1.70
41443--41490
23
2.1
23
100
0
96
12
20
0
66
1.24
42102--42136
17
2.2
17
90
10
56
82
2
8
5
0.91
42728--42768
14
3.1
13
86
13
57
75
0
17
7
1.02
59145--59183
16
2.3
17
86
8
53
69
5
5
20
1.28
60445--60474
11
2.6
12
94
5
53
10
6
6
76
1.15
60501--60814
128
2.4
128
90
0
475
29
20
16
34
1.94
65034--65072
6
6.5
6
87
0
51
46
0
30
23
1.53
68743--68781
6
6.5
6
87
0
51
46
0
30
23
1.53
74406--74441
18
2.0
18
100
0
72
38
22
0
38
1.54
81765--81825
31
1.9
31
87
9
88
50
4
1
42
1.33
82063--82113
16
3.2
16
86
5
59
31
23
0
45
1.53
88778--88813
17
2.1
18
90
10
58
27
0
2
69
1.02
89847--89898
26
2.1
23
86
10
68
46
0
5
48
1.26
89860--89997
57
2.4
59
85
7
178
45
0
2
52
1.13
89908--89987
16
5.4
16
68
22
50
43
0
1
55
1.08
91327--91386
28
2.1
28
81
0
66
43
8
6
41
1.61
91910--91954
23
2.0
23
82
8
56
51
4
2
42
1.34
91919--91961
22
2.0
22
81
9
52
53
4
2
39
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
95291--95510
100
2.2
100
90
0
359
25
16
24
34
1.95
96397--96436
21
1.9
21
100
0
80
20
5
42
32
1.73
105158--105208
3
17.3
3
95
4
95
68
0
0
31
0.90
105625--105668
11
3.9
11
79
5
52
34
0
4
61
1.16
127737--127763
2
13.5
2
100
0
54
0
0
48
51
1.00
131718--131761
19
2.3
18
82
17
54
56
2
4
36
1.32
134543--134690
65
2.3
65
94
1
253
47
1
6
44
1.38
134588--134688
30
3.2
30
67
16
87
48
0
6
43
1.36
134989--135040
26
2.0
26
85
7
70
38
9
9
42
1.70
135357--135414
27
2.2
26
78
3
62
51
17
6
24
1.69
136457--136491
16
2.2
16
89
0
52
31
14
2
51
1.57
138505--138584
20
4.0
20
68
20
58
47
0
1
51
1.08
138544--138586
10
4.1
10
80
11
50
46
0
0
53
1.00
138505--138600
51
1.9
50
89
6
149
48
0
1
50
1.07
138544--138586
11
4.1
11
85
8
63
46
0
0
53
1.00
138644--138687
6
7.2
6
94
2
52
0
54
0
45
0.99
138644--138687
12
3.7
12
87
0
61
0
54
0
45
0.99
138651--138684
17
2.0
17
88
0
50
0
58
0
41
0.98
138653--138688
6
6.0
6
96
0
54
0
61
0
38
0.96
139690--139746
9
6.1
9
75
20
55
43
0
0
56
0.99
143364--143402
16
2.4
16
73
0
51
28
12
15
43
1.83
145462--145571
48
2.3
48
87
1
159
47
21
10
20
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151015--151070
23
2.4
23
81
0
67
44
12
16
26
1.83

Tables:   1

The End!