Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015168.1 Kokia drynarioides strain JFW-HI SEQ_130212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92242

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2032--2069
14
2.8
14
84
4
51
50
0
0
50
1.00
2161--2268
34
3.1
34
83
6
146
20
34
0
45
1.51
2158--2268
35
3.2
35
81
8
147
19
34
0
45
1.51
9034--9107
25
2.7
28
83
12
100
47
25
9
17
1.78
10849--11147
29
10.2
29
71
16
183
32
23
5
39
1.77
10849--11105
30
8.8
29
72
14
181
31
22
5
40
1.77
11038--11170
59
2.3
57
84
7
171
32
29
6
32
1.82
13800--13839
20
2.0
20
85
0
53
67
5
0
27
1.11
14732--14761
14
2.1
14
93
0
51
56
0
0
43
0.99
15077--15118
14
2.8
16
82
14
61
50
0
0
50
1.00
15933--15970
17
2.1
18
85
9
51
26
2
5
65
1.27
16734--16766
2
16.5
2
100
0
66
48
0
0
51
1.00
16786--16825
19
2.1
19
90
0
62
40
0
0
60
0.97
17345--17392
22
2.3
20
80
19
55
60
0
0
39
0.97
24979--25015
18
2.1
18
94
0
65
24
32
8
35
1.85
26497--26573
23
3.3
23
92
0
127
41
20
28
9
1.83
26636--26683
24
1.9
26
84
16
66
31
22
0
45
1.53
29976--30032
28
2.0
28
83
12
73
45
7
7
40
1.58
34691--35043
57
6.1
55
79
9
264
37
2
23
35
1.70
34693--34963
28
9.5
28
73
7
179
37
1
24
35
1.67
34691--35053
29
12.6
28
72
8
194
37
3
23
35
1.70
36406--36496
29
3.0
30
74
4
94
47
1
1
50
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37294--37463
61
2.8
62
76
7
168
42
26
3
27
1.72
43042--43103
31
2.0
31
100
0
124
29
9
3
58
1.46
44543--44582
18
2.2
18
86
8
55
35
0
5
60
1.19
44494--44583
19
4.4
20
70
23
62
40
0
3
56
1.16
44970--45019
2
25.0
2
100
0
100
50
0
0
50
1.00
46877--46919
18
2.4
18
88
7
61
53
0
0
46
1.00
47936--47969
17
2.0
17
100
0
68
47
0
0
52
1.00
51146--51212
30
2.3
27
79
20
73
62
0
4
32
1.15
51381--51423
19
2.4
18
88
7
61
34
0
2
62
1.08
52817--52857
15
2.7
15
92
0
73
9
12
43
34
1.75
52816--52870
15
3.7
15
85
0
65
12
10
41
34
1.78
62078--62120
22
2.0
22
85
0
59
11
20
11
55
1.66
76463--76540
29
2.6
30
81
4
86
32
6
8
52
1.58
76758--76788
4
7.8
4
92
0
53
25
0
0
74
0.82
77391--77420
3
10.3
3
92
7
53
36
33
0
30
1.58
79345--79389
21
2.1
22
91
0
58
26
31
6
35
1.82

Tables:   1

The End!