Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015172.1 Kokia drynarioides strain JFW-HI SEQ_130216, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48503

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7503--7720
109
2.0
109
95
0
391
31
9
16
43
1.79
21409--21454
14
3.4
14
78
6
58
17
30
19
32
1.95
21803--21892
29
3.1
28
82
6
99
28
16
24
30
1.97
26778--26824
17
2.8
17
83
0
58
38
2
4
55
1.31
26782--26848
34
2.0
33
82
11
82
34
2
8
53
1.47
27552--27603
3
17.0
3
76
11
52
59
1
3
34
1.27
27798--27845
21
2.2
21
81
3
51
77
6
2
14
1.06
28706--28928
29
7.8
29
69
19
103
30
28
3
37
1.74
28706--28983
29
9.6
28
67
18
99
31
26
3
37
1.75
28741--28928
57
3.3
55
88
7
261
30
28
3
37
1.75
28741--28928
29
6.6
28
75
18
151
30
28
3
37
1.75
28765--28983
57
3.8
57
80
11
209
31
27
4
37
1.76
28970--29029
28
2.1
28
81
6
68
31
23
13
31
1.93
35779--35821
18
2.3
19
80
4
52
58
2
34
4
1.32
36987--37581
297
2.0
297
96
0
1109
33
14
24
28
1.94
41041--41222
96
1.9
95
80
10
210
36
13
20
29
1.91
41479--41688
29
7.1
28
72
14
154
30
3
31
34
1.76
41453--41689
59
4.0
59
85
1
303
28
3
34
33
1.75
41477--41686
30
7.1
30
72
10
171
30
3
32
33
1.76
41453--41689
119
2.0
118
84
0
303
28
3
34
33
1.75
43484--43508
11
2.3
11
100
0
50
8
8
16
68
1.38
43536--43646
17
6.4
17
80
4
132
53
2
0
43
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43536--43646
35
3.2
35
81
10
129
53
2
0
43
1.21
43555--43613
11
5.2
11
76
10
57
54
3
1
40
1.27
43536--43646
52
2.1
52
84
0
141
53
2
0
43
1.21
43536--43614
6
13.7
6
71
17
60
51
2
1
44
1.23
43990--44724
209
3.5
209
95
0
1308
20
21
23
33
1.97
45203--45263
27
2.2
27
91
2
95
54
8
19
18
1.68

Tables:   1

The End!