Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015175.1 Kokia drynarioides strain JFW-HI SEQ_130219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106858

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8614--8790
93
1.9
93
92
0
300
36
12
11
40
1.79
13778--13833
9
6.3
9
80
10
62
73
1
0
25
0.93
13787--13820
16
2.1
16
88
5
50
73
2
0
23
0.97
13778--13833
27
2.1
27
93
3
96
73
1
0
25
0.93
14136--14242
19
5.4
19
70
16
58
38
4
1
55
1.32
14288--14372
34
2.4
35
83
13
95
31
5
3
58
1.39
14320--14372
16
3.2
16
73
17
54
30
5
0
64
1.17
14322--14380
19
3.3
18
72
11
50
28
5
0
66
1.13
31779--31837
29
2.1
29
83
3
75
30
3
3
62
1.28
31901--31929
15
2.0
15
93
6
51
34
3
0
62
1.12
32171--32248
28
2.9
27
81
11
79
44
25
5
24
1.74
34412--34502
23
4.0
23
83
0
101
16
18
19
45
1.86
34424--34549
23
5.5
21
72
19
76
15
21
18
44
1.87
34413--34552
69
2.0
69
84
10
180
15
20
18
45
1.86
42073--42103
15
2.1
14
94
5
53
12
0
0
87
0.55
43298--43324
3
9.0
3
100
0
54
66
0
0
33
0.92
53279--53310
10
3.3
10
95
4
57
0
6
0
93
0.34
53278--53315
17
2.3
17
95
4
69
0
10
0
89
0.49
54444--54484
21
2.0
21
85
9
57
12
14
26
46
1.80
64816--64942
23
5.6
22
82
5
139
40
25
19
14
1.89
83040--83085
18
2.4
19
85
7
58
43
0
4
52
1.21
83025--83077
27
2.0
25
82
7
61
41
0
1
56
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83036--83085
19
2.6
19
81
12
57
44
0
4
52
1.20
83066--83106
19
2.2
18
87
12
57
39
0
4
56
1.21
83190--83242
23
2.2
24
86
6
72
43
15
3
37
1.64
85179--85251
19
3.9
18
69
26
55
28
1
4
65
1.19
87191--87223
15
2.1
17
88
11
52
48
0
0
51
1.00
89026--89061
18
1.9
19
94
5
65
19
0
0
80
0.71
94539--94572
15
2.3
15
94
0
59
44
26
8
20
1.81
98030--98061
14
2.3
15
89
10
50
50
0
0
50
1.00
100188--100218
15
2.1
15
100
0
62
38
19
6
35
1.77
102042--102274
57
4.1
56
81
7
227
32
15
9
43
1.78
102314--102497
57
3.2
57
84
4
230
42
8
19
29
1.81
103734--103829
33
2.8
35
84
4
124
23
23
15
36
1.94
105903--105927
13
1.9
13
100
0
50
8
12
40
40
1.72

Tables:   1

The End!