Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015180.1 Kokia drynarioides strain JFW-HI SEQ_130224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  162323

Tables:   1   

This is table  1  of  1  ( 52 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5087--5160
31
2.4
31
97
0
139
28
24
25
21
1.99
17316--17401
9
8.8
10
71
21
51
30
0
0
69
0.88
17319--17401
15
5.4
15
67
19
55
30
0
0
69
0.88
17313--17370
29
2.0
28
83
9
73
27
0
0
72
0.85
17345--17388
20
2.3
20
88
11
67
34
0
0
65
0.93
17357--17430
30
2.4
32
82
14
86
33
0
0
66
0.92
17311--17411
47
2.2
44
87
6
141
32
0
0
67
0.91
17357--17411
27
2.0
29
86
13
80
36
0
0
63
0.95
17323--17411
18
5.5
18
68
25
65
33
0
0
66
0.92
17325--17432
47
2.5
43
74
16
105
33
0
0
66
0.92
18972--19004
17
1.9
17
100
0
66
24
24
6
45
1.75
19467--19627
62
2.6
62
93
0
268
36
8
9
45
1.69
35294--35323
14
2.1
14
93
0
51
3
0
10
86
0.67
35364--35396
17
2.0
17
88
5
50
18
3
9
69
1.28
35389--35425
13
2.9
13
88
11
51
5
5
8
81
0.99
36252--36298
21
2.2
21
85
7
60
23
0
4
72
1.02
43486--43608
52
2.4
53
86
4
169
23
28
15
32
1.95
43519--43642
28
4.6
28
76
9
141
20
29
17
33
1.95
43744--43864
63
1.9
63
96
0
224
44
16
12
26
1.83
45635--45695
24
2.5
24
82
12
72
42
0
0
57
0.98
46490--46518
3
9.7
3
100
0
58
34
0
0
65
0.93
59977--60047
31
2.5
27
81
9
79
33
9
7
49
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65378--65451
7
10.1
7
87
8
103
71
2
0
25
0.99
67340--67398
24
2.5
24
86
8
77
33
11
16
37
1.86
67363--67409
23
2.0
23
84
8
60
40
10
17
31
1.83
72147--73111
483
2.0
479
87
5
1383
42
15
12
29
1.84
76521--76545
2
12.5
2
100
0
50
52
48
0
0
1.00
77946--77983
16
2.4
17
86
8
53
60
0
5
34
1.19
79912--79952
21
1.9
22
90
5
66
36
2
4
56
1.34
98404--98447
13
3.3
13
78
15
54
54
0
0
45
0.99
98634--98704
15
4.6
15
74
16
65
52
1
0
46
1.09
99249--99317
27
2.5
27
83
6
77
63
0
2
33
1.09
100905--100935
6
5.2
6
100
0
62
51
32
16
0
1.44
103988--104056
32
2.2
32
84
10
88
47
1
1
49
1.19
108027--108233
103
2.0
103
97
1
389
25
22
24
27
2.00
110163--110214
25
2.3
22
87
12
70
51
11
3
32
1.56
110667--110718
18
3.0
18
83
10
56
44
0
1
53
1.11
119037--119061
13
1.9
13
100
0
50
40
0
56
4
1.18
120676--120785
46
2.4
46
89
1
159
23
20
10
46
1.80
124237--124282
23
2.0
24
86
4
67
50
6
2
41
1.40
125476--125529
15
3.3
17
75
17
51
44
3
9
42
1.54
130154--130235
28
2.9
28
73
10
87
52
8
14
24
1.69
130571--130615
20
2.2
20
92
7
74
51
0
0
48
1.00
132405--132435
7
4.4
7
100
0
62
16
70
0
12
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
140606--140642
15
2.5
15
86
4
58
54
0
2
43
1.14
144582--144699
31
3.8
31
68
10
89
50
11
17
21
1.77
146559--146965
202
2.0
202
94
0
706
41
1
21
35
1.64
147025--147201
23
7.6
23
81
7
205
14
23
21
40
1.90
148847--148899
27
2.0
27
92
0
88
33
20
20
24
1.97
155956--156014
25
2.3
25
81
16
68
3
16
5
74
1.13
156665--156729
28
2.3
29
79
15
73
47
7
20
24
1.76
157072--157164
35
2.7
33
80
11
100
43
3
2
51
1.29

Tables:   1

The End!