Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015200.1 Kokia drynarioides strain JFW-HI SEQ_130244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  130893

Tables:   1   

This is table  1  of  1  ( 48 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1004--1053
24
2.1
24
100
0
100
30
30
4
36
1.76
3635--3661
6
4.5
6
100
0
54
85
14
0
0
0.61
5745--5798
23
2.3
23
93
0
90
9
29
22
38
1.85
5821--5865
23
2.0
23
86
0
63
15
22
26
35
1.94
11216--11260
24
1.9
23
81
4
54
60
2
6
31
1.35
11887--12004
61
2.0
58
81
5
137
27
15
11
46
1.79
12226--12284
31
1.9
31
85
0
82
52
11
13
22
1.72
14831--14883
4
13.2
4
79
15
56
1
32
0
66
1.03
14831--14883
20
2.7
19
82
8
70
1
32
0
66
1.03
15627--15664
19
2.0
19
85
10
51
68
2
0
28
1.03
32787--32845
21
2.8
21
82
10
59
72
1
10
15
1.18
33646--33688
19
2.3
19
84
8
52
58
4
0
37
1.19
34242--34435
103
1.9
104
82
12
240
25
25
14
34
1.94
35203--35262
13
4.8
12
77
18
61
80
0
3
16
0.85
36433--36472
21
1.9
21
94
0
71
27
17
12
42
1.85
38025--38084
16
3.9
15
74
10
50
73
1
10
15
1.17
38023--38082
22
2.8
22
87
7
79
73
1
10
15
1.17
38049--38078
15
1.9
15
93
6
51
70
0
13
16
1.18
38045--38084
16
2.5
17
80
12
57
75
0
10
15
1.05
39730--39772
23
1.9
22
85
4
59
39
4
0
55
1.20
40031--40060
2
15.0
2
100
0
60
50
0
50
0
1.00
58068--58139
31
2.3
31
85
4
92
25
11
9
54
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60501--60658
40
3.9
40
81
3
156
37
18
25
18
1.94
60501--60652
80
1.9
81
83
4
200
38
19
25
17
1.92
60543--60675
40
3.3
40
82
4
117
33
23
24
18
1.97
63192--63232
21
2.0
21
95
0
73
31
14
51
2
1.56
63193--63240
21
2.3
21
88
0
69
33
16
47
2
1.58
63594--63684
34
2.7
34
87
1
130
23
17
30
28
1.97
64073--64238
29
5.7
28
79
9
170
30
3
33
32
1.75
64072--64246
59
3.0
59
87
0
269
30
3
34
32
1.74
65998--66074
15
5.3
14
78
4
73
14
11
28
45
1.80
65997--66086
30
3.2
28
79
13
96
13
11
27
47
1.76
65992--66086
29
3.3
29
79
13
83
13
10
28
47
1.76
66107--66162
17
3.4
16
83
11
69
51
5
0
42
1.24
66247--66320
34
2.2
34
95
0
130
22
17
29
29
1.97
67427--67466
21
1.9
21
89
0
62
30
2
5
62
1.29
79155--79214
31
1.9
31
86
6
86
58
5
6
30
1.45
81958--81999
22
2.0
22
90
4
68
59
19
0
21
1.38
85100--85158
29
2.1
29
84
6
77
59
0
5
35
1.20
91810--91855
23
2.0
24
91
4
76
34
0
0
65
0.93
107668--107708
21
1.9
21
85
5
55
19
9
2
68
1.29
108790--108851
31
2.0
31
96
0
115
37
9
14
38
1.79
111711--111785
23
3.3
23
90
0
114
32
22
20
25
1.98
114223--114619
198
2.0
198
98
0
776
26
20
17
35
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117377--118067
350
2.0
350
99
0
1364
34
16
14
34
1.89
117966--118169
102
2.0
102
100
0
408
33
13
16
36
1.88
119459--119516
24
2.5
23
76
15
66
62
0
1
36
1.06
124322--124349
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!