Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015238.1 Kokia drynarioides strain JFW-HI SEQ_130283, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  155225

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2452--2493
15
2.7
16
88
3
68
28
0
0
71
0.86
2445--3517
383
2.8
387
88
5
1552
39
8
7
44
1.63
5715--5758
21
2.1
21
91
8
72
63
0
4
31
1.14
13732--13916
72
2.6
71
90
1
298
49
3
8
39
1.49
21336--21415
39
2.1
39
100
0
160
26
7
15
51
1.69
24981--25038
21
2.8
21
82
12
66
60
3
0
36
1.14
25004--25049
21
2.1
22
84
4
58
65
8
0
26
1.21
25520--25561
2
21.0
2
100
0
84
50
0
50
0
1.00
32288--32314
2
13.5
2
100
0
54
48
0
0
51
1.00
34316--34368
21
2.3
24
84
12
76
39
7
1
50
1.41
45308--45336
2
14.5
2
100
0
58
48
0
0
51
1.00
48158--48184
3
9.0
3
100
0
54
33
0
0
66
0.92
49277--49325
5
9.2
5
97
2
71
75
0
0
24
0.80
51891--51930
20
2.0
20
100
0
80
30
5
10
55
1.54
62089--62156
19
3.4
19
77
20
75
8
2
19
69
1.28
62116--62167
19
2.9
18
88
5
70
7
3
19
69
1.29
62159--62199
20
2.0
20
85
0
55
14
2
14
68
1.32
62199--62273
12
6.6
12
79
11
68
6
2
21
69
1.24
62201--62249
20
2.4
20
86
3
62
6
4
18
71
1.23
62202--62287
44
2.0
44
83
0
109
10
2
18
68
1.29
63088--63120
10
3.4
10
83
8
50
33
0
0
66
0.92
63837--63901
30
2.2
30
91
0
103
58
13
4
23
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69324--69348
2
12.5
2
100
0
50
52
0
0
48
1.00
74956--74992
7
5.3
7
96
0
65
13
40
13
32
1.84
97459--97512
22
2.3
24
81
12
69
51
7
0
40
1.30
99165--99225
19
3.2
19
67
17
54
24
18
3
54
1.58
99150--99226
38
2.0
38
97
0
145
23
14
2
59
1.47
106080--106104
13
1.9
13
100
0
50
16
32
28
24
1.96
116023--116065
18
2.4
18
96
0
77
51
4
27
16
1.64
120237--120320
41
2.0
41
97
0
159
16
22
23
36
1.94
120489--120550
21
3.0
21
72
6
63
24
1
20
53
1.55
127402--127437
2
17.5
2
94
5
63
50
0
2
47
1.15
128218--128318
27
4.0
25
89
10
129
40
21
13
23
1.89
128229--128311
27
3.1
27
100
0
166
40
22
14
21
1.90
128241--128290
16
3.4
16
69
25
56
40
24
16
20
1.91
129345--129383
21
1.9
20
84
5
51
66
5
2
25
1.25
135688--135749
31
1.9
31
87
6
88
43
3
0
53
1.17
155168--155199
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!