Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015241.1 Kokia drynarioides strain JFW-HI SEQ_130286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  171737

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4390--4415
3
8.7
3
100
0
52
69
0
30
0
0.89
5892--5924
16
2.0
17
88
5
50
33
0
6
60
1.21
10426--10452
12
2.2
12
100
0
54
92
0
7
0
0.38
19356--19394
18
2.1
19
85
4
53
61
5
2
30
1.31
19379--19425
18
2.6
18
83
10
60
53
2
0
44
1.12
39170--39226
29
2.0
29
89
0
87
42
15
17
24
1.88
39240--39340
31
3.3
32
70
14
106
49
10
15
23
1.76
42409--42462
25
2.2
25
83
6
65
68
5
9
16
1.35
50876--50940
34
1.9
34
84
6
87
35
6
6
52
1.51
69084--69117
10
3.3
11
84
16
54
73
0
17
8
1.08
71211--71817
117
5.2
117
89
1
872
16
24
19
38
1.92
81368--81667
51
5.9
51
90
0
420
14
27
21
37
1.91
82069--82164
48
2.0
48
81
0
111
31
17
17
33
1.94
84653--84719
30
2.2
31
89
2
100
14
26
14
43
1.85
84683--85164
51
9.5
51
85
0
624
16
25
18
39
1.91
87223--87370
73
2.0
73
100
0
296
23
22
34
18
1.96
95287--95319
12
2.7
12
95
4
57
3
24
24
48
1.65
100523--100570
2
24.0
2
100
0
96
50
0
0
50
1.00
103662--103696
16
2.1
17
89
5
54
74
0
2
22
0.95
103934--103959
3
8.7
3
100
0
52
0
34
0
65
0.93
106467--106539
32
2.4
30
80
8
76
47
1
0
50
1.09
106484--106546
30
2.0
32
87
6
94
44
0
1
53
1.10
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106952--106987
19
2.0
18
89
10
56
22
5
11
61
1.50
109773--109938
57
3.0
54
81
9
176
21
32
10
35
1.87
111550--111584
17
2.1
16
89
5
52
60
2
0
37
1.12
115686--115729
20
2.3
20
84
7
56
22
11
2
63
1.38
123771--123931
79
2.0
79
93
0
277
33
21
15
29
1.94
127758--127808
19
2.7
20
84
9
70
35
0
1
62
1.06
131109--131135
7
3.9
7
100
0
54
14
14
14
55
1.70
140371--140409
14
2.7
15
80
11
55
41
0
5
53
1.23
140765--140826
30
2.1
30
84
6
81
62
3
0
33
1.11
141191--141249
31
1.9
31
86
6
84
45
5
0
49
1.24
143377--143408
4
8.0
4
100
0
64
25
0
25
50
1.50
146180--146209
4
7.5
4
100
0
60
50
23
0
26
1.50
146234--146593
191
1.9
191
88
0
549
31
19
11
37
1.88
148683--148725
21
2.0
22
86
9
61
48
0
0
51
1.00
156925--156959
2
17.5
2
93
0
61
48
2
48
0
1.16
159397--159458
26
2.4
25
73
7
61
38
3
20
37
1.69
159785--159828
17
2.8
15
80
12
52
50
2
4
43
1.35
159785--159829
15
2.9
15
81
12
54
48
2
4
44
1.35
160108--160139
13
2.4
14
90
10
50
37
0
6
56
1.25
171669--171737
30
2.3
30
82
0
75
18
60
5
14
1.53

Tables:   1

The End!