Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015247.1 Kokia drynarioides strain JFW-HI SEQ_130292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  112077

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10371--10406
19
1.9
19
88
5
56
55
2
0
41
1.14
22120--22161
17
2.4
18
84
4
50
9
2
38
50
1.48
22219--22304
17
5.2
17
87
6
106
51
6
0
41
1.29
24579--24603
9
2.8
9
100
0
50
68
0
0
32
0.90
27238--27279
16
2.6
16
81
7
50
45
2
4
47
1.36
28241--28339
24
4.1
24
88
5
137
56
8
10
25
1.59
29460--29570
29
3.8
27
72
17
80
37
10
22
28
1.88
29552--29864
29
10.7
29
67
17
103
30
3
27
38
1.75
29534--29864
59
5.6
59
75
12
254
30
4
27
37
1.77
29528--29838
117
2.6
115
80
7
306
31
4
27
36
1.78
29613--29876
30
9.0
29
66
22
79
29
3
27
39
1.73
30884--30932
24
2.0
25
84
11
66
48
0
0
51
1.00
31877--31943
6
11.7
6
74
15
61
46
0
1
52
1.09
31877--31941
17
3.8
17
89
0
103
44
0
1
53
1.09
31879--31955
23
3.4
24
76
15
67
45
1
1
51
1.17
33584--33767
29
6.3
29
82
7
176
33
32
3
30
1.76
33596--33739
29
4.9
29
85
8
186
34
30
3
31
1.75
33584--33740
59
2.7
58
85
4
208
33
31
3
31
1.74
33584--33767
58
3.1
56
82
5
197
33
32
3
30
1.76
33611--33829
58
3.8
58
81
6
160
33
30
4
31
1.77
39964--39988
11
2.3
11
100
0
50
48
0
0
52
1.00
42994--43026
3
11.0
3
100
0
66
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56319--56361
17
2.5
18
88
7
63
34
0
0
65
0.93
56315--56361
8
5.6
8
78
16
51
36
0
0
63
0.94
56792--56867
28
2.6
30
79
12
86
30
2
7
59
1.40
63541--63587
19
2.6
19
80
12
55
61
0
0
38
0.96
63538--63587
16
2.9
17
76
21
50
62
0
0
38
0.96
65582--65616
18
1.9
18
88
0
52
48
40
0
11
1.39
74626--74672
19
2.5
19
86
6
60
40
8
17
34
1.79
78444--78468
13
1.9
13
100
0
50
64
0
0
36
0.94
82409--82449
20
2.0
21
86
13
59
56
2
2
39
1.26
82405--82480
37
2.1
37
80
14
86
61
2
2
32
1.23
93778--93802
2
12.5
2
100
0
50
48
0
0
52
1.00
97434--97478
21
2.3
19
84
7
54
33
15
11
40
1.83
97627--97669
21
2.0
23
81
9
54
18
6
27
46
1.75
98398--98436
18
2.2
18
86
4
53
12
0
12
74
1.08
98396--98424
12
2.3
13
94
5
51
10
0
13
75
1.04
103064--103154
44
2.1
44
81
8
105
41
13
10
34
1.79
105504--105545
21
2.0
21
85
0
57
54
7
0
38
1.28
108801--108859
30
2.0
30
93
0
100
28
3
10
57
1.48
109186--109240
26
2.1
26
83
6
67
32
10
18
38
1.85
110744--110783
19
2.1
19
86
9
55
40
0
10
50
1.36
111371--111430
24
2.5
24
100
0
120
25
16
35
23
1.95

Tables:   1

The End!