Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015256.1 Kokia drynarioides strain JFW-HI SEQ_130301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  145560

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--83
10
3.3
10
88
12
50
18
3
0
78
0.87
10597--10649
24
2.2
24
82
0
61
28
7
11
52
1.64
13649--13796
23
6.3
23
77
7
95
13
22
22
41
1.89
15022--15072
24
2.1
24
92
0
84
21
11
11
54
1.68
21532--21559
2
14.0
2
100
0
56
50
0
0
50
1.00
23391--23417
13
2.1
13
100
0
54
0
7
0
92
0.38
24961--25014
27
2.0
27
85
3
72
42
1
1
53
1.22
25183--25250
22
3.0
23
73
20
63
30
1
2
64
1.17
25275--25316
15
2.7
16
77
7
50
50
2
0
47
1.14
33512--33552
21
2.0
21
85
9
57
36
4
0
58
1.20
35920--37223
654
2.0
654
95
0
2320
37
18
15
28
1.91
36568--38580
717
2.8
718
90
0
3105
37
17
15
29
1.91
41403--41429
8
3.4
8
100
0
54
25
0
11
62
1.28
45251--45365
46
2.4
47
70
12
108
53
9
9
26
1.64
45475--45727
47
5.5
47
77
6
230
50
13
9
25
1.72
45829--45989
47
3.5
47
77
5
166
50
14
10
24
1.75
45756--46091
172
2.0
171
83
4
435
49
13
12
24
1.77
46820--46876
26
2.2
25
81
3
69
28
1
1
68
1.09
55454--55487
17
2.1
17
88
5
52
41
0
29
29
1.57
60690--60751
17
3.8
16
79
10
63
67
3
1
27
1.15
60835--60873
13
2.7
15
76
15
55
58
5
7
28
1.47
61012--61058
14
3.3
14
85
11
60
42
0
4
53
1.20
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
90739--90769
13
2.4
13
100
0
62
48
6
6
38
1.55
97670--97873
103
2.0
101
95
1
363
24
23
22
29
1.99
98668--98834
87
1.9
87
100
0
334
39
15
15
29
1.88
106947--106973
11
2.5
11
100
0
54
66
0
0
33
0.92
107063--107128
26
2.4
27
73
14
64
51
16
18
13
1.76
107255--107309
28
2.0
28
96
0
101
18
7
21
52
1.69
122925--122979
28
2.0
28
92
0
92
52
0
5
41
1.24
129490--129529
20
2.0
20
85
0
53
32
0
10
57
1.32
145215--145263
20
2.4
20
86
3
62
63
0
32
4
1.13

Tables:   1

The End!