Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015279.1 Kokia drynarioides strain JFW-HI SEQ_130324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  271778

Tables:   1   

This is table  1  of  1  ( 60 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1836--1870
14
2.5
14
95
0
61
60
11
8
20
1.57
2234--2266
16
1.9
17
88
11
50
75
6
12
6
1.16
2735--2804
12
6.0
12
75
12
74
42
18
15
22
1.88
2736--2803
35
1.9
35
84
0
91
42
19
16
22
1.89
3502--3535
15
2.3
15
94
0
59
61
17
2
17
1.46
3594--3668
20
3.7
19
72
22
55
12
13
12
62
1.54
3594--3685
41
2.3
40
81
5
96
16
11
9
61
1.55
17227--17285
31
1.9
31
86
6
84
37
6
8
47
1.61
28667--28701
6
6.0
6
86
6
54
2
14
0
82
0.77
38513--38574
31
2.0
31
84
6
81
38
11
12
37
1.80
45193--45240
23
2.1
23
88
0
69
27
20
10
41
1.85
45339--45413
31
2.4
31
88
0
114
26
20
10
42
1.84
45599--45727
26
4.5
29
71
23
96
51
10
14
23
1.74
45585--45727
58
2.5
57
85
8
177
53
10
14
21
1.71
51803--51840
5
7.8
5
88
5
51
2
10
0
86
0.66
51803--51834
9
3.4
9
95
4
55
0
12
0
87
0.54
51803--51840
19
2.0
19
89
0
58
2
10
0
86
0.66
64567--64611
16
2.9
16
78
15
58
60
13
0
26
1.34
68678--68715
18
2.1
19
85
9
53
55
23
0
21
1.44
73827--73876
26
1.9
26
84
8
66
66
0
0
34
0.92
75655--75760
46
2.3
46
83
1
142
36
1
3
57
1.28
85448--85478
6
5.2
6
96
0
53
38
32
16
12
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85989--86036
19
2.6
18
81
18
62
45
6
0
47
1.27
94246--94305
28
2.2
29
85
8
81
63
5
5
26
1.36
100735--100801
30
2.2
30
84
5
82
50
8
5
34
1.58
111988--112036
9
5.2
10
78
9
50
61
2
2
34
1.19
111988--112044
19
3.0
20
72
10
57
59
1
3
35
1.25
112423--112464
22
1.9
22
95
0
75
61
23
7
7
1.47
113601--113647
21
2.1
23
84
7
62
40
6
4
48
1.48
129516--129579
31
2.1
31
82
8
78
35
3
12
48
1.57
135962--136021
26
2.3
25
80
13
59
61
1
0
36
1.06
137396--137447
21
2.5
21
84
6
61
75
1
1
21
1.00
137394--137473
26
3.2
24
77
18
76
70
2
2
25
1.13
142830--142860
2
15.5
2
100
0
62
48
0
0
51
1.00
142884--142963
40
2.0
40
82
0
97
38
0
6
55
1.25
149585--149670
44
2.0
44
86
2
120
44
6
24
24
1.78
153467--153572
33
3.1
33
67
15
88
32
18
19
29
1.96
160085--160153
30
2.3
30
92
0
111
31
18
17
31
1.94
165619--165771
28
5.1
28
68
22
96
38
8
5
47
1.56
165584--165765
95
1.9
96
96
1
339
37
8
6
47
1.59
166233--166287
20
2.7
20
97
2
101
32
3
5
58
1.38
172928--172978
6
8.5
6
100
0
102
15
33
15
35
1.90
186159--186193
2
17.5
2
100
0
70
0
48
0
51
1.00
192287--192319
2
16.5
2
100
0
66
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196657--196729
30
2.4
30
86
6
94
43
2
4
49
1.36
207304--207363
28
2.1
28
82
11
70
60
1
1
36
1.17
208285--208331
25
1.9
24
95
4
85
59
0
2
38
1.09
208277--208335
31
1.9
30
89
3
91
57
0
1
40
1.09
209638--209831
98
2.0
100
89
3
302
42
6
21
28
1.78
215482--215532
22
2.3
22
100
0
102
66
7
7
17
1.41
235425--235559
67
2.0
67
97
0
252
29
17
10
42
1.82
236780--236821
17
2.4
17
88
4
57
66
0
9
23
1.21
238587--238663
37
2.1
38
85
2
102
35
24
15
24
1.94
238530--238717
101
1.9
101
94
0
331
34
25
16
23
1.95
238538--238747
101
2.1
101
89
0
305
33
23
17
25
1.96
248639--248668
3
10.0
3
100
0
60
66
0
33
0
0.92
256114--256165
14
3.7
14
82
7
61
23
7
9
59
1.54
259699--259779
42
1.9
42
92
0
135
39
9
24
25
1.86
270666--270700
2
17.5
2
100
0
70
51
0
48
0
1.00
271748--271778
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!