Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01001528.1 Kokia drynarioides strain JFW-HI SEQ_113094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46401

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
598--1034
30
14.8
29
74
12
309
33
30
5
30
1.80
599--856
59
4.4
59
83
4
306
33
31
5
29
1.79
624--1034
88
4.6
88
74
11
315
33
30
5
31
1.79
578--1034
59
7.8
58
77
9
301
33
30
5
31
1.79
600--1034
147
2.9
145
79
7
412
33
30
5
31
1.79
4916--5010
46
2.1
46
95
0
172
41
6
21
31
1.78
8811--8847
10
3.7
10
88
0
56
0
27
0
72
0.84
8805--8861
20
2.8
20
81
2
60
0
35
0
64
0.93
8819--8873
5
10.8
5
80
3
56
0
40
0
60
0.97
15606--15650
23
2.0
23
86
8
65
28
2
13
55
1.50
16933--16975
21
2.0
21
90
0
68
60
0
39
0
0.97
16934--16974
15
2.7
16
85
7
50
63
0
36
0
0.95
16934--16974
12
3.4
13
80
12
52
63
0
36
0
0.95
18176--18216
3
14.0
3
94
5
75
65
0
34
0
0.93
18564--18595
14
2.3
14
94
0
55
3
0
12
84
0.74
20867--20956
45
2.0
45
91
0
144
47
7
10
34
1.66
25452--25537
42
2.0
42
90
0
136
19
25
20
33
1.97
25455--25549
42
2.3
42
84
0
109
21
24
21
33
1.97
35966--36036
27
2.6
27
76
13
72
39
4
4
52
1.41
36503--36554
24
2.2
24
85
0
68
53
5
3
36
1.43
42079--42134
24
2.3
24
87
0
76
46
7
7
39
1.59
42090--42141
24
2.2
24
89
0
77
50
3
5
40
1.45
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44302--44332
15
2.1
15
100
0
62
32
6
35
25
1.82
45681--45734
23
2.3
23
78
18
58
20
3
0
75
0.95
45669--45715
17
2.7
18
84
12
62
19
0
2
78
0.85

Tables:   1

The End!