Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015289.1 Kokia drynarioides strain JFW-HI SEQ_130334, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  116736

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4894--4943
16
3.2
16
73
21
52
34
0
6
60
1.21
5590--5645
4
13.8
4
77
17
53
0
26
0
73
0.84
5583--5645
17
3.9
16
78
16
67
0
25
0
74
0.82
5583--5648
32
2.2
31
86
8
91
0
25
0
74
0.82
8365--8450
43
2.0
43
86
0
118
46
12
13
26
1.80
9196--9226
4
7.8
4
100
0
62
51
22
0
25
1.48
12366--12420
9
5.9
9
81
8
56
52
1
43
1
1.22
12388--12419
3
10.7
3
93
0
55
62
0
37
0
0.95
15094--15209
61
1.9
59
82
6
144
52
6
1
39
1.36
26293--26328
3
12.0
3
100
0
72
33
0
0
66
0.92
27356--27425
9
7.4
9
80
7
50
31
0
14
54
1.40
27358--27416
6
9.8
6
94
0
64
33
0
15
50
1.44
27361--27395
3
11.7
3
87
0
52
34
0
25
40
1.56
27394--27419
3
8.7
3
100
0
52
34
0
0
65
0.93
27410--27446
18
2.1
18
90
10
58
18
0
13
67
1.23
27437--27461
9
2.8
9
100
0
50
12
0
20
68
1.21
27416--27446
6
5.2
6
100
0
62
16
0
16
67
1.23
27540--27708
90
1.9
90
82
7
218
37
16
10
34
1.83
27539--27727
90
2.1
90
80
5
213
35
16
10
37
1.82
27884--27957
20
3.8
20
76
7
71
59
1
2
36
1.20
28190--28376
10
19.1
10
65
19
58
33
4
1
60
1.25
28195--28244
19
2.6
19
79
17
59
26
6
2
66
1.26
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28233--28374
29
4.8
29
73
14
103
33
3
1
61
1.22
28259--28336
28
2.8
28
77
13
79
38
2
0
58
1.12
28257--28330
37
2.0
36
82
7
87
39
2
0
58
1.13
28293--28353
21
2.8
22
82
7
63
42
0
0
57
0.98
28438--28676
89
2.7
88
80
3
230
30
10
19
39
1.85
31124--31176
7
7.4
7
81
8
54
0
26
0
73
0.83
31127--31176
4
12.8
4
79
12
59
0
26
0
74
0.83
51900--51934
17
2.1
17
100
0
70
40
34
5
20
1.76
55347--55399
23
2.2
24
90
3
81
56
0
0
43
0.99
56033--56066
18
1.9
18
88
5
52
73
5
5
14
1.21
70585--70711
64
2.0
64
88
0
191
53
13
9
23
1.68
70695--70766
34
2.1
34
92
0
117
50
19
6
23
1.72
86851--86875
4
6.2
4
100
0
50
76
0
24
0
0.80
88060--88123
20
3.2
20
74
14
62
67
0
7
25
1.17
88070--88123
19
2.8
18
80
20
65
70
0
7
22
1.12
96588--96646
19
3.2
19
72
9
50
49
0
3
47
1.18
110806--110855
4
12.8
4
81
12
50
72
0
28
0
0.86
110811--110883
18
4.2
16
80
15
65
63
0
36
0
0.95
110806--110858
7
7.4
7
77
12
54
71
0
28
0
0.86
110839--110883
9
5.1
9
81
13
58
55
0
44
0
0.99
111228--111270
21
2.1
21
86
4
61
25
2
13
58
1.48
111535--111585
16
3.2
16
73
15
52
60
5
0
33
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112887--112971
43
2.0
43
81
9
102
29
11
10
48
1.73
113540--113634
45
2.1
45
92
0
154
36
29
14
18
1.91

Tables:   1

The End!