Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015300.1 Kokia drynarioides strain JFW-HI SEQ_130345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72467

Tables:   1   

This is table  1  of  1  ( 46 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
640--677
19
2.0
20
85
10
53
28
5
2
63
1.30
640--683
20
2.2
20
84
8
54
29
4
4
61
1.36
1426--1469
22
2.0
23
82
13
56
40
2
2
54
1.25
3287--3342
26
2.2
26
100
0
112
21
16
3
58
1.52
4414--4514
17
5.9
17
74
3
78
54
5
4
34
1.46
5612--5662
12
4.2
12
82
0
66
58
0
39
1
1.09
5616--5666
2
25.5
2
79
0
57
56
0
41
1
1.10
5623--5666
8
5.5
8
97
0
79
59
0
40
0
0.98
6835--6878
21
2.0
22
86
4
63
52
2
2
43
1.26
13437--13784
49
7.1
49
73
11
277
39
18
23
19
1.93
13453--13784
98
3.4
97
85
4
436
38
18
24
19
1.93
14197--14255
17
3.5
17
85
0
64
42
1
5
50
1.34
14959--14997
3
13.0
3
91
0
60
61
0
2
35
1.10
16149--16318
29
5.9
29
77
12
154
38
22
1
37
1.62
16118--16318
58
3.5
55
79
12
192
38
22
1
37
1.63
16121--16317
29
6.8
27
71
16
128
38
22
1
38
1.64
16353--16436
28
2.9
29
84
7
100
35
22
7
34
1.82
22620--22647
13
2.2
13
100
0
56
21
17
39
21
1.93
37815--37859
22
2.2
20
92
8
72
20
0
28
51
1.48
38692--38716
8
3.1
8
100
0
50
52
0
0
48
1.00
41422--41472
16
3.1
16
77
8
50
29
1
1
66
1.13
47635--47684
24
2.1
23
82
10
57
34
6
2
58
1.34
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47658--47818
58
2.9
54
76
15
161
43
1
1
52
1.22
47706--47822
58
2.0
57
86
4
164
45
0
1
52
1.17
47977--48030
16
3.4
15
82
10
63
29
24
3
42
1.72
47986--48032
16
2.9
16
83
0
67
29
25
2
42
1.67
52270--52316
24
2.0
24
84
16
62
34
4
0
61
1.15
52920--53117
98
2.0
98
99
0
387
26
25
21
26
1.99
55817--55857
20
2.1
21
86
13
61
41
4
0
53
1.22
56046--56092
24
2.0
24
91
0
76
48
8
0
42
1.33
57321--57484
81
2.0
81
100
0
328
40
6
7
45
1.57
57508--57559
5
10.6
5
82
12
54
53
1
5
38
1.36
58542--58570
14
2.0
15
93
6
51
41
0
0
58
0.98
59306--59394
17
5.2
16
70
20
65
55
4
5
34
1.44
59355--59391
18
2.1
18
90
10
58
54
5
5
35
1.47
59357--59400
18
2.4
17
81
11
52
61
2
4
31
1.28
59877--59910
16
2.1
17
88
5
52
32
5
5
55
1.48
59871--59911
15
2.6
16
82
14
50
34
4
4
56
1.42
62108--62137
14
2.1
15
93
6
53
70
0
3
26
1.03
66884--66927
4
10.5
4
85
9
52
68
0
29
2
1.02
66885--66927
21
2.0
21
82
8
52
67
0
30
2
1.03
66991--67048
29
1.9
31
86
6
84
24
0
15
60
1.35
67456--67504
24
2.0
24
88
0
71
46
22
14
16
1.82
70393--70498
43
2.5
43
87
6
153
49
11
8
31
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71646--71782
47
2.9
48
83
4
181
51
8
6
32
1.58
72022--72061
12
3.4
12
79
6
55
70
5
0
25
1.08

Tables:   1

The End!