Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015306.1 Kokia drynarioides strain JFW-HI SEQ_130351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63935

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4211--4248
20
1.9
20
84
10
51
63
7
0
28
1.23
5286--5343
28
2.1
28
96
0
107
32
25
24
17
1.96
9056--9230
12
15.4
12
71
10
109
71
20
2
5
1.19
9055--9161
56
1.9
57
86
1
153
70
19
3
6
1.26
9042--9230
44
4.5
44
74
16
125
70
20
2
6
1.21
9100--9230
15
8.3
15
66
20
54
73
19
1
5
1.11
9109--9216
9
12.2
9
66
20
50
75
19
1
3
1.05
9110--9230
22
5.5
21
71
13
82
73
20
1
4
1.08
9761--9786
13
2.0
13
100
0
52
23
7
15
53
1.67
13197--13236
12
3.3
12
89
0
62
37
2
5
55
1.35
13952--14036
6
14.2
6
73
9
75
56
1
2
40
1.20
13955--14036
17
4.6
17
81
15
94
57
1
2
39
1.20
13955--14036
37
2.3
35
89
8
121
57
1
2
39
1.20
40832--40967
66
2.1
66
98
1
265
33
4
14
47
1.64
42781--42821
20
2.0
20
95
4
73
31
0
0
68
0.90
42771--42823
11
4.9
11
77
13
56
33
0
0
66
0.92
44151--44200
23
2.1
24
96
3
93
64
4
4
28
1.30
44233--44275
20
2.2
20
91
0
68
72
6
2
18
1.19
44325--44366
9
4.4
9
90
6
57
80
19
0
0
0.70
44313--44438
21
5.6
21
78
10
81
73
17
2
6
1.14
44312--44454
36
4.2
35
83
7
170
72
17
2
6
1.19
44488--44561
9
8.0
9
72
11
51
70
18
2
8
1.25
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44480--44563
29
3.0
28
75
16
84
70
19
3
7
1.26
44509--44577
20
3.3
21
78
15
81
68
23
2
5
1.25
44426--44540
50
2.4
48
82
8
137
66
21
5
6
1.36
44492--44567
18
4.2
17
75
15
71
71
19
2
6
1.21
44492--44578
41
2.2
38
83
6
111
70
20
2
6
1.22
45194--45218
2
12.5
2
100
0
50
0
48
0
52
1.00
52991--53037
21
2.3
20
85
3
58
57
2
0
40
1.11
52993--53038
20
2.3
20
85
7
58
56
2
0
41
1.11
54005--54047
19
2.2
20
84
12
54
65
0
4
30
1.13
54495--54577
41
2.0
42
92
2
141
48
21
0
30
1.51

Tables:   1

The End!