Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01015309.1 Kokia drynarioides strain JFW-HI SEQ_130354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  296964

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2654--2692
20
2.0
20
89
0
60
33
35
0
30
1.58
5838--5863
2
13.0
2
100
0
52
50
0
50
0
1.00
7273--7355
31
2.8
28
79
13
78
33
9
3
53
1.51
8094--8118
3
8.3
3
100
0
50
68
0
0
32
0.90
21755--21781
4
6.8
4
100
0
54
51
22
0
25
1.48
25717--25753
15
2.3
17
86
9
51
51
0
0
48
1.00
25839--25872
17
2.1
16
88
5
50
47
0
0
52
1.00
27182--27218
6
6.2
6
93
0
65
35
0
64
0
0.94
27801--27844
16
2.6
17
78
3
54
61
2
2
34
1.21
40452--40492
21
2.0
21
85
0
55
29
21
29
19
1.98
48665--48690
9
2.9
9
100
0
52
11
0
0
88
0.52
59300--59339
6
6.7
6
100
0
80
50
15
0
35
1.44
61143--61197
24
2.3
24
96
0
101
40
25
3
30
1.73
72537--72569
17
1.9
17
88
11
50
54
0
6
39
1.25
75948--75984
19
1.9
19
88
0
56
29
10
2
56
1.47
76523--76593
31
2.3
31
76
9
81
45
12
8
33
1.73
81263--81317
22
2.4
23
87
6
85
9
23
27
40
1.85
81313--81366
25
2.2
25
93
3
92
11
31
16
40
1.84
86316--86341
5
5.2
5
100
0
52
0
19
0
80
0.71
105808--105849
22
1.9
22
85
9
59
38
2
4
54
1.34
108628--108653
3
8.7
3
100
0
52
30
0
0
69
0.89
115637--115669
2
16.5
2
100
0
66
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124699--124786
25
3.4
25
67
11
61
42
12
6
38
1.69
128142--128200
30
2.0
29
83
6
73
50
6
8
33
1.59
129026--129068
20
2.1
21
86
4
61
32
4
18
44
1.71
129034--129074
21
2.0
20
90
4
64
31
0
24
43
1.54
129038--129082
21
2.1
21
87
0
63
26
2
26
44
1.66
136768--136843
16
4.4
17
78
15
66
73
2
1
22
1.03
136811--136845
18
2.1
18
89
10
56
77
5
0
17
0.96
137188--137228
20
2.0
21
85
4
57
41
2
53
2
1.27
139091--139609
237
2.2
238
93
2
887
36
12
14
36
1.84
140608--140653
3
15.3
3
100
0
92
67
0
0
32
0.91
152572--152615
5
8.8
5
94
0
61
52
0
2
45
1.13
158278--158310
12
2.8
12
95
4
59
42
33
0
24
1.55
177299--177330
3
10.7
3
100
0
64
34
65
0
0
0.93
186788--186936
76
1.9
77
86
4
212
28
11
12
48
1.75
187379--187468
29
3.1
28
79
9
92
5
4
15
74
1.17
187402--187532
12
11.7
11
68
14
63
6
3
16
73
1.20
187402--187532
23
5.9
22
67
15
63
6
3
16
73
1.20
187457--187491
11
3.1
11
84
8
52
5
2
20
71
1.19
187419--187493
32
2.4
31
82
6
96
6
2
17
73
1.17
187421--187595
12
13.9
12
69
20
76
9
3
17
69
1.29
187444--187572
24
5.1
24
71
18
102
10
4
17
67
1.37
204608--204641
15
2.1
16
89
10
52
29
0
0
70
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205071--205149
39
2.0
39
97
0
149
53
3
10
32
1.53
213912--213987
35
2.1
37
80
9
86
52
6
3
36
1.46
214565--214597
17
1.9
17
93
0
57
57
0
3
39
1.14
224152--224888
270
2.7
269
82
5
842
26
14
23
35
1.93
224151--224816
132
5.0
133
71
10
476
25
14
23
36
1.93
228414--228485
30
2.4
31
81
6
85
37
5
23
33
1.78
231484--231565
28
2.9
29
72
7
78
18
21
24
35
1.96
233534--233574
21
2.0
21
85
9
57
51
2
0
46
1.14
234070--234644
285
2.0
285
98
0
1125
36
14
14
34
1.86
234758--234838
38
2.1
38
81
4
92
43
2
1
53
1.22
234866--234908
16
2.6
18
78
14
56
23
4
6
65
1.37
252762--252814
24
2.4
21
81
12
61
47
1
1
49
1.23
252995--253026
13
2.5
13
100
0
64
34
15
6
43
1.72
256234--256269
4
9.2
4
87
6
56
19
0
0
80
0.71
256737--256796
22
2.7
22
76
0
75
65
13
6
15
1.46
263002--263083
43
1.9
42
85
7
112
32
23
18
25
1.97
267028--267081
20
2.8
19
74
2
54
59
0
0
40
0.98
267126--267156
6
5.2
6
96
0
53
0
51
0
48
1.00
267123--267157
11
3.1
11
88
8
52
0
57
0
42
0.99
289544--289599
20
2.8
19
76
10
58
12
3
7
76
1.11

Tables:   1

The End!